Gene Mbar_A2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2109 
Symbol 
ID3627166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2665469 
End bp2666563 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content39% 
IMG OID637700987 
Producthypothetical protein 
Protein accessionYP_305620 
Protein GI73669605 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.720138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA AGCAACAGGC ATGGAATGAC TTACATAGAC TGACCAATGA TAAGGATCAT 
GATATTAGGT CTAGTGCTTC CAGAGCTCTT GATTTTGTAT TTCCTGAGAT ACCAGATAAG
CAACAGGCAT GGAATGATTT ACTTAGACTG ATCAATGATA AAGATCATGA TGTTAGGTCC
AGTGCTTCCA GAGCTCTTGA TTCTGCATTT ACTCAAGTAC CAGATAGGCA ACAGGCATGG
AATGATTTAC TTAGACTAAC TAACGATGAA GACTGGCTAG TAAGATCTAG TGCTGCCGAA
GCTCTTGGTT CTGCGTTTTC TCAAGTACCC GATAAACAAC AGGCATGGAA TGACCTACAT
AGACTGATCA ATGATGAAAA CATTTTTGTG AGGATAAATG CTACCTTAGC TCTTGAATCT
GCGTTTTCTC AAGTGCCAGA TAAACAACGG TCATTGAATA ATTTACTTAG TCTGACCAAT
GATGAAGACC ACGAAGTTAG GTCCAGTGCC GCCTATGCTC TTGGTTCTGC GTTTTCCCAC
TTTTCAGATA AGCAACAGGC ATGGAATGAT TTACTTAAAC TGACCAATGA TCAAAACAGT
TCTGTGAGAT CCTCCTCAAA TCATTCTCTT GGAAGAGTTT CGATATTCAT GGCTTCCCAG
GCAGAAACAG AGGATGATTA CAAAAAAGAA TTAGAAAAGG CAATAGAATT TTTCGAAACT
GCAACAAAGG AAGCATCTTA TGATAATCCT GCTCAATTTT GTCTCCCTTT TTATCGTTCA
TTCTATACAA TAATTTTCAA AAAACAGGAA GCAAAAGGAG AAGTGAACAA ATATCTGGAA
AAAGCTAAAG CTGCAATTGA AGACTCCGAA GGCAAAAAAC AGCTCTTTGA AGCTGTTCAA
AGTCTCGCCG AAGCACTAAA AGAAGTCCAG AATATGGAAA ATCTAGACTT GTCTGGGATG
AAAGATGAGC TTAGTTTCTA CGGTAAATAT TGTGATTACG CTGCAGAACT AATGAGCTGC
GCCGACGAAA AATCACCGTT TGCGACAGAA GTTCTGAAAA AGGCTGCCAA TTCTAGTACA
TCGATTCTCA AATAA
 
Protein sequence
MPDKQQAWND LHRLTNDKDH DIRSSASRAL DFVFPEIPDK QQAWNDLLRL INDKDHDVRS 
SASRALDSAF TQVPDRQQAW NDLLRLTNDE DWLVRSSAAE ALGSAFSQVP DKQQAWNDLH
RLINDENIFV RINATLALES AFSQVPDKQR SLNNLLSLTN DEDHEVRSSA AYALGSAFSH
FSDKQQAWND LLKLTNDQNS SVRSSSNHSL GRVSIFMASQ AETEDDYKKE LEKAIEFFET
ATKEASYDNP AQFCLPFYRS FYTIIFKKQE AKGEVNKYLE KAKAAIEDSE GKKQLFEAVQ
SLAEALKEVQ NMENLDLSGM KDELSFYGKY CDYAAELMSC ADEKSPFATE VLKKAANSST
SILK