Gene Mbar_A2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2070 
Symbol 
ID3626464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2616141 
End bp2617925 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content41% 
IMG OID637700945 
Productsensory transduction histidine kinase 
Protein accessionYP_305581 
Protein GI73669566 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.965046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGG TGTCGGAGGA TTATGAAACT TTAAATGCGA ACTTCCAGAC CGCAGGTAGT 
AAAAACGACA TAGGAGGAGA AGCTCTTCAC GCAGCCCTGG AAAAAGAAGA AACTCTGAGA
ATGATGATCA ATAATAGTCA TGTAGTGCTT TTTCTCTGGA AGAATAAAGA TAACTGGCCT
GTGGAGTTTG TCTCCGAAAA TGTGGGGAAA TTTGGATACT CGGTAGAAGA TTTCACTTCT
GGCAGGACGC GATATAAAGA TTTAATATAT TTCGATGACC TCAAAGAGGT CGAAGAGGAG
TTTAAGAAAA AAGTAAAAAG TGGGGTTTCT GCTTTCAGCT TGGAATACAG GATTATAACA
AAAGCAGGAG ATATCCGATG GATAAACGAA AGGACCTTTA TCCAGAGAAA TACAAGCGGA
GAGGCGACAC ACTTCCAGGG AGTAGTGCTC GATATCACCA GGCGGAAAAA AGGTGAAGAA
GAACTGGAAG AAACTATTAA GATGCAGAAA GTGTTGATTA CAGCAGTTAA TAATAGTCCT
GCAGTGGTCT TTCTCTGGAA AAATGAGAAG TACTGGCCTG CAATTTTTGT ATCAGATAAT
GTTGTACAGT TTGGATACAC GGTTGATGAC TTTCTATCAC AGAAAATTCA GTACGGAAGA
ATCATACACT CTGATGACCT GAAAAGAGTG GGAGAGGAGC TTGACAGGAG CATTCAGAAC
GGGGAGGTAA GCTTCAACTC TGAGTACAGA ATTTTTACAA AAGCCGGAGA TATGTTGTGG
GTAAACGAGA GAACATTCAT CCAGAGGGAT ATAGAAGGGA AAGTAACCTG CTTTCAGGGA
ATAGTACTGG ATATAACCCA TAGAAAGAAA ACTGAAAAAG CCCTGAGAAA ATCACTAAAA
ACGCAGGAAA TGCTGAAAAG TATAATTAAC AAAAGTCCGG CAGTAGCTTT TCTAAGGAAA
AATATAGAAA ACTTGCCTGC AAATTTAGAA AACTGGCCTG TAGATTATAT TTCTGAAAAC
GTAATGCAGT TTGGGTACTC AGTAGAAGAC TTTCTCTCCG GAAGAGTACT TTATGGGGAC
ATAATCCATA GAGAAGATAT TCATACTGTT GTCGAAAGTC TGGCACGCTC AGTAAGAGAA
GGATACGATT CCTTCGAGAT GGAATATAGA ATTATTACAG GAAACGGCAG TATACGCTGG
GTCGAAGACC GAACGTTTAT CCAGCGAAAC AGTACAGGCA AGGTCACTCA TTTTCAGGGA
ATAATCATCG ATGTCACTGG GAAAAAAGAG GCTGAGAAAA TGCTCGAAAT CCAGAGAGAG
CTGGGAGTAG CCCTCAGTAC TACCTGGAAT CTTCAGACCA TGCTTAACCA GATCCTTAAT
GCCTGTCTGA AAATAGAAGA GATAGATGCC GCAGGAATAT ACTTGAAAGA CGAACTCCTG
GATCAGATTA ATCTGGTTGC ACATCGTGGA CTCTCTCCCG AATTCGTGGC AAGTATTTCG
ATATATAGAG CAGATTCCCC TGAAGCTCGG CAGATCTGGA CTGAAAAGCC GGTTTACAGG
ATGGATTTTT TTGCAGATGA AATGGCAGAT TTAATTAAAA ATGAAAAAAT TACTTCAGTA
GCCGTGCTTC CTATGAAGCA CAGAGGAGAA ATTATAGGCA GCCTTAATTT TGCTTCTCAT
ACTACAGACA GGATTCCACA GAACGTACGT AATTTTCTTG AAAGTGTAGC CCTCCAGGTA
GTGAACTATA TAGCTCCTCT TCGTATTGCG GCAGACCTTG GATAA
 
Protein sequence
MDEVSEDYET LNANFQTAGS KNDIGGEALH AALEKEETLR MMINNSHVVL FLWKNKDNWP 
VEFVSENVGK FGYSVEDFTS GRTRYKDLIY FDDLKEVEEE FKKKVKSGVS AFSLEYRIIT
KAGDIRWINE RTFIQRNTSG EATHFQGVVL DITRRKKGEE ELEETIKMQK VLITAVNNSP
AVVFLWKNEK YWPAIFVSDN VVQFGYTVDD FLSQKIQYGR IIHSDDLKRV GEELDRSIQN
GEVSFNSEYR IFTKAGDMLW VNERTFIQRD IEGKVTCFQG IVLDITHRKK TEKALRKSLK
TQEMLKSIIN KSPAVAFLRK NIENLPANLE NWPVDYISEN VMQFGYSVED FLSGRVLYGD
IIHREDIHTV VESLARSVRE GYDSFEMEYR IITGNGSIRW VEDRTFIQRN STGKVTHFQG
IIIDVTGKKE AEKMLEIQRE LGVALSTTWN LQTMLNQILN ACLKIEEIDA AGIYLKDELL
DQINLVAHRG LSPEFVASIS IYRADSPEAR QIWTEKPVYR MDFFADEMAD LIKNEKITSV
AVLPMKHRGE IIGSLNFASH TTDRIPQNVR NFLESVALQV VNYIAPLRIA ADLG