Gene Mbar_A2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2036 
Symbol 
ID3625551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2572158 
End bp2572946 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content45% 
IMG OID637700914 
Producthypothetical protein 
Protein accessionYP_305550 
Protein GI73669535 
COG category[K] Transcription 
COG ID[COG1497] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.286499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.372572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA TCCTCCAGAC TAAAAGCGGA GTAACCAAGT TTCAGGTGCT TATCGAAATT 
GCAGCCCACC AGCCGAATGT AAGACAAAAA GAAATTGCCG CAAAGATAGG AATAACTCCC
CAGGCAGTTT CCGAATATAT TAAAGAACTT GTAAATGACG GGCTGATAGT TACTGAGGGC
CGGGTCAGGT ACAGGATTAC AAAAGAGGGT GTGGAATGGG TCCTTGAAAA TGCCACAGAA
ATGAAGCAGT ACGCCCGTTT TGTCATGGAG GATATAATCA GCCATGTTTC AACCTGGACA
GCGATTGCAA AAGAGAATGT AAAGAAAGAC CAGCGAGTAT ACCTGAAAAT GGAAAAAGGA
CTCCTGTACG TAAGCAGCAC GGAAAAAACA GGTGCATCAG GCAATGTAAT TTCCGACGCA
CCTGCTGGGG AAGATGTAGG AGTAACGAGC CTGCGAGGCC TAATCGACCT GGAAAATGCT
ACAATTACAA TCTGCAAAGT TCCGAGGATT GAGCGTGGAG GCTCAAGAAA GGTAGATATC
GAACGCTTGA GGATCCTGAC AAGCTCAAAA CCCTATATAG CAGCTATAGG CGTGGAAGCA
CTTATCGCCC TGCGCAAGCT CGACATAACC CCAAATGTTA TGTTTGGAAG TAATGAATCA
GTTATTGAGG CTGCATACCA TGGTTTATCA TCCATTGTAG TCTCAGTAGA TGAACAGGTT
CCTTCCCTAC TTAACAGGCT GGAAACCGAA AATCTTGAGT ACGAACTCGT AGACTTGGCT
CTCGAATAA
 
Protein sequence
MIKILQTKSG VTKFQVLIEI AAHQPNVRQK EIAAKIGITP QAVSEYIKEL VNDGLIVTEG 
RVRYRITKEG VEWVLENATE MKQYARFVME DIISHVSTWT AIAKENVKKD QRVYLKMEKG
LLYVSSTEKT GASGNVISDA PAGEDVGVTS LRGLIDLENA TITICKVPRI ERGGSRKVDI
ERLRILTSSK PYIAAIGVEA LIALRKLDIT PNVMFGSNES VIEAAYHGLS SIVVSVDEQV
PSLLNRLETE NLEYELVDLA LE