Gene Mbar_A1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1953 
Symbol 
ID3625492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2440972 
End bp2441682 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID637700835 
Productheterodisulfide reductase subunit HdrC 
Protein accessionYP_305471 
Protein GI73669456 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAT ATGTAAACGA GTACGATACC CCGGAATGTA AAACCCTTGC AGAAACCGCA 
AAGAAAAGCA TCCGGACACC TGCCTCTCTG GGGCTTGACC GCTGCATCCA GTGCGGCGCC
TGCACGGCTT CCTGTCCTGC AGCCCGCTTT ACAGATTACA GCCCGCGCCA GATTGTAAAA
AAAGTACTGG AAAACGACCG TAGTGTGCTT GAGTCCGAAA TGATCTGGTC CTGTTTTTAC
TGTTATTCCT GTAACCTGCG CTGTCCCAGA AATAATAGCC CTGTAACAAT TGTACAGGTG
CTCAGGCAGA TGGCCATCAA CGAGGGCATA GGAGTTGAAA AGCTTGCCTA CTTCCTTGAG
ATAGGAGAAT ATCTCGCAGA AAACGGAGCT AGCAAGATAC CAGGTCCTGG AGCTAAGAAT
ATGGAGAGAG ACCTTGGGGA ACGCTGGATC AGTTTTAAAA AGAACCTTGA GTCAATTCGT
GATGAACTGG GGCTGAGTTC AAAGGATATC AGAAACACCC ATGGGGAAGT TCAGGCCATT
CTTGAAGCCA CAGGCTATTT TGAAAGGGAA AAATGGATCA AGGCAAAAAT ACAGGAAAAA
CTTTTGCATC AACTCCTGGA GAACCAGTAC ATCAAGAGAG AAAATAGAAG CGGAGATTTC
GGCTTTGAAA ACGATAGAAG ATATCCCGGA CAGCCAGCTT TTATTATTTA A
 
Protein sequence
MIPYVNEYDT PECKTLAETA KKSIRTPASL GLDRCIQCGA CTASCPAARF TDYSPRQIVK 
KVLENDRSVL ESEMIWSCFY CYSCNLRCPR NNSPVTIVQV LRQMAINEGI GVEKLAYFLE
IGEYLAENGA SKIPGPGAKN MERDLGERWI SFKKNLESIR DELGLSSKDI RNTHGEVQAI
LEATGYFERE KWIKAKIQEK LLHQLLENQY IKRENRSGDF GFENDRRYPG QPAFII