| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1840 |
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| Symbol | |
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| ID | 3625298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2301688 |
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| End bp | 2303478 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700722 |
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| Product | methanophenazine-reducing hydrogenase, large subunit |
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| Protein accession | YP_305361 |
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| Protein GI | 73669346 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0613857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAGG TTACTGTTGA TCCTCTTACG AGAATTGAAG GACACTACAG GATCAATACC
GAAGTCAATG AGGAAGGCGT AATTACTGAT GCCCAGAGTA ATGGCTTGCA GTTAAGGGGT
TTTGAACGTC TCTTACAGCA CCAGGATCCT AGGGATGCAT CACTTCTGTC CCAGAGGATT
TGTGGTGTTT GTCCTGTTAG CCACGGGATA GCTGCAGCAA ATGCCCTGGA TGACCTCTTC
GGGGTTGCAG GTGAGGTTCC AATAGACGGT CTTCTAATGC GAAATGTCCA CCAGGCTCTG
AACTTCATAG CCAGCCATGC AGCACATATC TATCTTCTTT GGGGTCCTGA CCTTGCAAAC
CCGGCTTACC GTGATATCCT GGCAAAATAC GGGGATGTTG GAAATGCAGT CTGGAAAGAA
CTTCAGGGGC GTTTTGCGCC TTTGATTTAT CAGCTTGACG GCACCAGTTA TCCGGCTGGC
TCGTCTTATC TAGGCTCTAT AGTGGAATTT CGCCGCTTGC ACGAAGCTAT TTCTTTAATA
GCTAGCAAGA TGCCTCATCC GGTTCTTCAG CATGTTGGAG GTGTAGTTTA TTCTCCGACG
GTTGCTGATA TCGGGCAAAT TTTAAGCTAT ATCACGAAAA CGATGGAGTT CGTTGAAGCA
TTTACTCTTG GAGTCTCTCC CGATATCTGG ATTGAAAATA CTTATAGAGC TTCTTCTCCT
CAAAAGGCTG CTAATTTCGT TCTTAATCAC CTGCAAGAAC TTCTGAATAA ATCCCTTGAC
AACAAGGACT TCTCACACTC GGCTGGTTGG GGAGATGTCC CTCTCTTTGC AGCTTTCGGC
TCGGAGCTGA TAGGGGAAAA ACTTCTCGGT CTGCCTATCA GTATGAAAAT GGATCTTGCA
GGGACTTACA AAGATCCCGG TAAGATCGGT TTTCTTTCTT ACGGAGTTTT CTTTAAGCCC
GAGAACGGCA ATGGGTATGA CCCAACGAGT CCTGCGGACA GCAGAGTTAT TTCTTCCGGC
TATATGAATG GATATTTCAA GCTTGAAAAA TTCGACTACA AGAAGATCTC AGAAAGTATC
AACCACTCTT TTTACATTGA CGACGTAAAA GATCGTCCTC CATGGAACGG GGTTACGGTT
CCGGAAGGAA ACCCTGAAAA TATCGATTAT ACAAAAGGAT CAAAGAGTCG GTATTCCTGG
ACAAAAGCTC CTCATTATGA TGGAATTCCA TGTGAGGTTG GGCCCCTTGC TCGTATGATA
ATAATGGGGG AGCCTCTTGT TACGGGATTG GTAAAAACTT TTCAAGATAA CGGCTACTAT
CCTGTCAATA ACTATACCCG CATGATTGCA AGGATGCAGG AAATTCTTGT AGTGGTTCCA
GAACTTACGA AATGGCTCAC ACAGGATATT CAGGCAGGCG GAAAGGTTGC TGTACATACC
GATCTTTCTA TGGCAAAGAG TTCCACAGGA ATGGGTTTAT GGGAAGCTCC GCGAGGGGCA
CTGGGACACT GGGTTGCTAC AGGGCCGGAT TCTATGGTAA CTCTTTACCA GGCTGTAGTC
CCAAGTACCT GGAACCTTGC TCCCAGGAAT TCACAGGAGA TTCCAAGTCC TGTTGAACAG
GCTCTCATAG GTACCAAAAT TTCCGCTGCC GAAAATGCAC TTGGAGTGGA TTATTCCAAT
CCTCTTGGAA TCCTGCACAC AGCTCGCTCT TACGATCCCT GTCTGGCATG TGCAGTTCAT
ACAATTGATA AAACCGGAAA GCACCCGGAT TATATCATCA AGGTACTTTG A
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| Protein sequence | MVQVTVDPLT RIEGHYRINT EVNEEGVITD AQSNGLQLRG FERLLQHQDP RDASLLSQRI
CGVCPVSHGI AAANALDDLF GVAGEVPIDG LLMRNVHQAL NFIASHAAHI YLLWGPDLAN
PAYRDILAKY GDVGNAVWKE LQGRFAPLIY QLDGTSYPAG SSYLGSIVEF RRLHEAISLI
ASKMPHPVLQ HVGGVVYSPT VADIGQILSY ITKTMEFVEA FTLGVSPDIW IENTYRASSP
QKAANFVLNH LQELLNKSLD NKDFSHSAGW GDVPLFAAFG SELIGEKLLG LPISMKMDLA
GTYKDPGKIG FLSYGVFFKP ENGNGYDPTS PADSRVISSG YMNGYFKLEK FDYKKISESI
NHSFYIDDVK DRPPWNGVTV PEGNPENIDY TKGSKSRYSW TKAPHYDGIP CEVGPLARMI
IMGEPLVTGL VKTFQDNGYY PVNNYTRMIA RMQEILVVVP ELTKWLTQDI QAGGKVAVHT
DLSMAKSSTG MGLWEAPRGA LGHWVATGPD SMVTLYQAVV PSTWNLAPRN SQEIPSPVEQ
ALIGTKISAA ENALGVDYSN PLGILHTARS YDPCLACAVH TIDKTGKHPD YIIKVL
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