Gene Mbar_A1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1625 
Symbol 
ID3627323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1999567 
End bp2001918 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content43% 
IMG OID637700505 
Producthypothetical protein 
Protein accessionYP_305150 
Protein GI73669135 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG AAAATGTCGA CATTTTTACT TTTAACTCTC ACAAACCAAA AAAGGAGCCA 
ACTCCTGTAG ATTCAGGAAC GGAAGAAAAC GCAGGTTCAA AGGAAAGTCT TGCTGAGATA
AGAAAGGAGA GTCTTGCTGA GTCAAGAAAG GAAAGTCTTG CTGAGATAAG AAAGGAAAGT
CTTGCTGAGC CAAGAAAAGA AAGTCTTGCT GAGTCAAGAA AGGAAAGTCC TGATGAGCCA
AGAAAGGAAA ATCCTGATGA GATAAATCCT GAAAACAGGA ATATGAGCAA GACAGTAAAT
TCCGTTGAAG ATGCTCCCAA TCTGGTCACC TCTAATCACG TTAACTCTAT ACCCACACCC
GATACTGAAG AAATACTGCA AGCTTCATCA TCTGAGAATC TAAGTAAAGA TTGTCAGAAT
GATCTATCAG ATCATATTTT AAAAACCGAA TCAAATATCG AATCTGATGT TCTTTCAGGC
CCTGGCGAAT CAATTTTTAA ATCTTCTTCT CTACCCAGAA CTGCTCCTGT ATCTAAGCCT
GTATCTAAAA ATGCTTCTCT ATCTATTTCA GATCTATCTC TTGAATCCGA AGTTCTCGGG
AGTTCCGGAA AAGAAGCTTT CCCATTTGAA GGCTTTGCCG GATGTGATGA TAATGTCCTG
AAGGCTTCTC CGGTTTCAGA AGCTTTCGGG ATTGTCACTA CAGGTATAGA ACCCCTTGAA
TTAACTCCTT CAGGAGCTGT AATCACAGGT TACATTACAT CAGCTCGACG GGATGAGATA
AGGCTGGGAA CATATGTTGT TGTGCCTTAC GAAAACGGAG AAAAACTCTT TGCCAGGGTG
GGAAAACTCC AGTATAGGCA GGAGTTTGTG GTAGACGATG CAACTGAAAT TCATTCAAGG
CGCATGCTCA GTGCCCTTGG AAACCCTGTA AATGAAGACG ATTACAAGTT CCTTGCCTGT
CTTGATCCGC TCTGTATTCT TTACCGAAAA GCCGAAGGCA AACTCACTCG GCGGATGGCA
GACCGGATTC CTCACCCTAA CACTCCTATC CTGCCTGTTA CTGACAGGCT TGAAGTCCAG
ACAGGGCTTA ACATTCCTGA AGACGGAATC TTTCTCGGCC ACCTGAGTGT AGGAGGTGAG
CTTTTAAAAA CCAATTCCGA GCCCGAAACG GTAGCATATT ACCTGAGGAA TGACTATTCC
ATGGGTGACC CTCTTATTTT CAGGCATATG CTTATTTGCG GGAGCACAGG GACAGGAAAA
ACGTTCCTCT CTAAGAATAT CCTCCGCCAG TTCATGAATG AAAACAACAG GTACAGGCTG
CGGGGTTCTC CTAGCAAAGC ACGGAAAAAT CCCTGCCTGG TAATTATGGA CCCTCAGGAC
GAATATTCAC AGCTTTTCGA GGATAACGAA AACCTCACTG AGGACGATAA ATTCCGGTTT
GAATCCGAAA ATGTAACATA TGGCCGGGTA CTCTCTACAA AGGCTTTCGT GGCAAAAGTC
GATGGGCAAA GATATCCCGG GGATAAATCC AGAGCCGAGC AGATTGAGTT TACAATTCCT
TTTTCGCTTG TAGAACACAA TTCCTGGCTT ATTGCAGCAG CCGGAATGTC AGAACTCCAG
TATATCGGGC TTGAAGTGCT TCTTGGAGAT TTCTTCAAGT CAAGTGTACC CCATACTTAC
CAGAATTTCA TCAACCATAT TGATAATGAA GGTACCCGTT CCTACTATGT TGACAGCGGG
AAGCTGCACG AGTCTTCATA CGATGGGATT GTAAGAAGGG TAAGAAGTCA CTTTTTCTCG
AAGGTCTTTG ACCGGGATGC GACTTCAATT ACTGAACTTG TGGATAAGAT CTTCAAACCA
GGGCAGGTTT CGGTTTTCCC GACCGAATAT ATAAGTGCTC CGAGAATTCG CGACCTCATA
GTACTCACAA TTATGAGCCT GATAGTGGAC AACAAATTAA GTACGACTGG AAATGAAGCT
ATTAAAGAAA CTCCAATAAT TCTTGCACTG GATGAGGCTC ATCGGTATCT CTCAAATGCA
AATGGGGAAC ACTCTCGCCT TATTATTTCA CGTTTTGCAG ATGCAGCTCG TCAGGGACGA
AAAGAAGGAC TGGGACTTTT CTTAATTACT CAGGACCCTC AGGACATCGA TGACACGGTT
TTCAAGCAGA TAAATACGAA GCTGATCCTT AACCTAAATA ATGACGCAGC CATTACGTCT
CTAAAAGTTC CGAAAGAGTA CGAGCGGAGA ATTCCTTATC TTAAGAAAGG ACAGATGATA
ATTCACTCCC CGGATAACAG TGATATCGTG GAGATAATCG GGCTTTCAAA TTGTGTAGTC
CGTCATCGGT GA
 
Protein sequence
MKYENVDIFT FNSHKPKKEP TPVDSGTEEN AGSKESLAEI RKESLAESRK ESLAEIRKES 
LAEPRKESLA ESRKESPDEP RKENPDEINP ENRNMSKTVN SVEDAPNLVT SNHVNSIPTP
DTEEILQASS SENLSKDCQN DLSDHILKTE SNIESDVLSG PGESIFKSSS LPRTAPVSKP
VSKNASLSIS DLSLESEVLG SSGKEAFPFE GFAGCDDNVL KASPVSEAFG IVTTGIEPLE
LTPSGAVITG YITSARRDEI RLGTYVVVPY ENGEKLFARV GKLQYRQEFV VDDATEIHSR
RMLSALGNPV NEDDYKFLAC LDPLCILYRK AEGKLTRRMA DRIPHPNTPI LPVTDRLEVQ
TGLNIPEDGI FLGHLSVGGE LLKTNSEPET VAYYLRNDYS MGDPLIFRHM LICGSTGTGK
TFLSKNILRQ FMNENNRYRL RGSPSKARKN PCLVIMDPQD EYSQLFEDNE NLTEDDKFRF
ESENVTYGRV LSTKAFVAKV DGQRYPGDKS RAEQIEFTIP FSLVEHNSWL IAAAGMSELQ
YIGLEVLLGD FFKSSVPHTY QNFINHIDNE GTRSYYVDSG KLHESSYDGI VRRVRSHFFS
KVFDRDATSI TELVDKIFKP GQVSVFPTEY ISAPRIRDLI VLTIMSLIVD NKLSTTGNEA
IKETPIILAL DEAHRYLSNA NGEHSRLIIS RFADAARQGR KEGLGLFLIT QDPQDIDDTV
FKQINTKLIL NLNNDAAITS LKVPKEYERR IPYLKKGQMI IHSPDNSDIV EIIGLSNCVV
RHR