| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1477 |
|---|
| Symbol | |
|---|
| ID | 3627534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1819547 |
|---|
| End bp | 1820602 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637700364 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305013 |
|---|
| Protein GI | 73668998 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA GACAGATAGG AACCCTATTT CTGACAGCAT GTCTTATTTT AACAGCCGTG
CCCGCTGCTT TAGGCGCACA GAACACAATT ACTGTAAATC CTACATCTGG ATCAGATGCC
CAGAATGAAA TTAATAATGC AATAAATTTC GTAGTATCAG GAGCACAGAA CAATATTACT
GTAAATCCGA CATTTGGATC AGATGCCCAG AATGAAATTA ATAATGCAAT AAATTCCGTA
GCATCAGGAG CGACATCAGG TAACCCTGGA TATGTTCTCC TTGCCGCTGG CACTTATAAG
ATAAGTGCAC CTATAGTTTT GAAATCTAAT GTAGTACTGA AAGGTGCAGG CGACGATACA
ATAATCTTTG CTAATGGCTC AGTTTGCCAC TCAGTGGAAT CACCTGCATA TGTATTCGGG
TCAGGTGTCT CCAACGTTGA AGTGTGTAAC CTTCAGTTCA AAAGTACGGC CACCGGACCT
AGTGACGGAG GTCACGGAGG CTATCGAAAC TGCATACAGT TCAGGTCTTC GAAGGATAGT
AAAGTACATG ATATTTTATT CACCCGCTAT TTATATAGTG ATGGTGTCAG AATCACTAAA
AGCTCTGGAA TAGAAGTATA TAACTGCAGA ATGCATTCCG TAGGGCACGA TGGTGTAGGA
TTCTTATCAG AGACTAAGGA TTCCAGAATG TATAACTGTG ATGTTGAGGT TCAAACCAAC
ACAGGTGTCA GGATAAACAA TTGCACAAAC ATTGAAGTGG ATCACAATAC CTTTTCAGGT
AGTGCCGAGT CTGGATGGTG TTGCGTTGAA ATGGTAAATC CACTGACGAA TGTGAATGTC
CATCATAATA TAATGCATGA TTTCAAGGGC TCAAGCAGCA GTGCAGGCAT TGGAAGTTTT
AATGCAAGCG GGTCAATTAA CGTTTATGAT AATGTTATGT GGACTGTGTC GCCTTATGTT
ATGATAGGAT CAGGCTCAAA CATATTAGAA CCATTTGATC ACAGTCTTGA GAATTGGGTA
GCAAAAGGAT ATGGATACGG CTATGTTGCC AACTGA
|
|---|
| Protein sequence | MLKRQIGTLF LTACLILTAV PAALGAQNTI TVNPTSGSDA QNEINNAINF VVSGAQNNIT
VNPTFGSDAQ NEINNAINSV ASGATSGNPG YVLLAAGTYK ISAPIVLKSN VVLKGAGDDT
IIFANGSVCH SVESPAYVFG SGVSNVEVCN LQFKSTATGP SDGGHGGYRN CIQFRSSKDS
KVHDILFTRY LYSDGVRITK SSGIEVYNCR MHSVGHDGVG FLSETKDSRM YNCDVEVQTN
TGVRINNCTN IEVDHNTFSG SAESGWCCVE MVNPLTNVNV HHNIMHDFKG SSSSAGIGSF
NASGSINVYD NVMWTVSPYV MIGSGSNILE PFDHSLENWV AKGYGYGYVA N
|
|---|
| |