| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1471 |
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| Symbol | |
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| ID | 3627752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1806344 |
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| End bp | 1808401 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637700359 |
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| Product | cell surface protein |
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| Protein accession | YP_305008 |
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| Protein GI | 73668993 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATTA ACAAAAAATC GTATTCAGTG GTCTTAGCAT CAGCAGTTCT GATTTTATTT
TTAATTCTGG TTTCATCTGC AGCATCGGCG GTTACTGAGC AAACTGCTTC GCTCACTATC
AATGAAACTC CGATAACCAC CAGTGGATCA GCAACGTCTC CTTCTATATA TGGTGACAGG
ATAGTATGGA AGGACTGGCG TAATGGGAAC CGGGATGATG GACCTTTCAA TATTTACATG
TACAATATCT CCACTCAGAA GGAAACTCAA ATTACTACCG GTGGATCAGC ATGTTGTCCT
TCTATATATG GTGACAGGAT AGTATGGAAG GAATGGCGTA ATGGGAACCA GAATGATACC
GAGGAAGAAT ATGATGTATA CATGTACGAT CTCTCCACTC ACAAGGAGAC TCGGATAAAC
AATAGACCAG TCCCTTATGA CTACTTAGGG TATAGCTTCG GACCGTATAT ATCCGGTAAC
ACGATAATGT GGGGTGGCCC ACATGGTTAT TACATTTATG ATATCTCCAC TCAGGAAACT
CATATCGATA ATATGTCAGC ACCCTATCCT GTTTTTTTCG GTAACATAGT AGTGTGGGTA
CCTGATATTG ATGGACGCCC GAGTAATCTC ATAATGTACG ACCTCTCCAC TCACAAGGAA
ACTCAGATTA CCAACAACGA TTCAGCATTC AATCCTGATA TCTACGGAGA TATAATAGTG
TGGGCAGATT GGCGCCAGAG AGATGATGGA TATCAATACT CTGAGATCTA CATGTATGAT
CTTTCCACTA AGAAGGAAAC TCAAATTACC AACAGCGGAT CAACACATGG ATCAGCACAT
TATTATAGTC CTAGAATCTC CGAGGACAGG ATAATTTGGC TGGATACCCG AGATAGTGGA
AGTATTTACA TGTATAATAT CTCAACTCAA GAGGAAACTC AGACTAACAA TACATCAATT
AGGCAAAGGC AAGGATTTAC TTTCTATGGT GATAAGATAG TGTGGTCGGA TTGGAAAAAT
GAAAAACCCA ATGTCTACAT GGGTACTCTC ACCAGTTCAA ACCTGCCAAT TGCTTCCTTC
TCTGCATCTC CAACCTCAGG AAAAGCCCCA ATGAAAGTGC AGTTTACTGA CAAAAGTACC
GGAACACCTA CTTCCTGGTT CTGGAATTTT GGAGACGGAT CAAAGTCATT CCTTCAGAAT
CCGGTTCATA AGTATTCAAA GGCAGGGATT TATAATGTTA GCTTAACGGT AAAGAATGCG
GTAGGCCGTA ACACGGTAAC AAAAACCGGA TATATAAAAG TGGTAGCAAA ACCAGTTGCT
GCATTCTCTG CATATCCTAC CTCAGGAAAA ACACCATTAA ACGTTAAATT TACTGACACA
AGCACAGGAA TACCTGCTTC CTGGTTCTGG AATTTCGGAG ACGGATCAAA GTCATTCCTT
CAGAATCCGG TTCATAAGTA TTCAAAGGCA GGAATATATA CTGTTAGCTT AACAGTAAAG
AATGCAGCAG GACGTAGCGC GGTAACAAAA ACAGAATATA TAAAAGTGGT AGCAAAACCA
GTTTCTGCAT TCTCTGCATA TCCAACATCC GGAAAATATC CATTAAACGT TAAATTTACT
GACAAAAGTA CAGGAACACC AACGAAATGG AAATGGGATT TTGGAGATGG ATCAAAGTCA
TTCCTTCAGA ATCCGACTCA TAAATATTCC AAAGCAGGAA AATACACAGT AACCCTCACA
GTAACCAATG CGGTAGGCAT CAACACAGCA ACAAAATCAA AGTATATAAC CGTGACAGGA
ACTTCGCAAG CTCCGACTGC AGATTTCTGG GGCTGGCCAT TATCAGGAAA AGCTCCGCTA
AAGGTAACAT TCACAGAGAC GAGCAAAGGA TCACCAACCT CATGGAAATG GGATTTCGGA
GATGGAAAAT ATTCAACAGA AAAGAGTCCA ACACACACAT ATTCAGCAGC AGGAACTTAC
ACGGTTAAAC TCATAGCAAC AAATGAAGCA GGAAGTAGTA CAAAATCAAA ATGGAAATAT
ATAAAAGTGG CAAAGTGA
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| Protein sequence | MKINKKSYSV VLASAVLILF LILVSSAASA VTEQTASLTI NETPITTSGS ATSPSIYGDR
IVWKDWRNGN RDDGPFNIYM YNISTQKETQ ITTGGSACCP SIYGDRIVWK EWRNGNQNDT
EEEYDVYMYD LSTHKETRIN NRPVPYDYLG YSFGPYISGN TIMWGGPHGY YIYDISTQET
HIDNMSAPYP VFFGNIVVWV PDIDGRPSNL IMYDLSTHKE TQITNNDSAF NPDIYGDIIV
WADWRQRDDG YQYSEIYMYD LSTKKETQIT NSGSTHGSAH YYSPRISEDR IIWLDTRDSG
SIYMYNISTQ EETQTNNTSI RQRQGFTFYG DKIVWSDWKN EKPNVYMGTL TSSNLPIASF
SASPTSGKAP MKVQFTDKST GTPTSWFWNF GDGSKSFLQN PVHKYSKAGI YNVSLTVKNA
VGRNTVTKTG YIKVVAKPVA AFSAYPTSGK TPLNVKFTDT STGIPASWFW NFGDGSKSFL
QNPVHKYSKA GIYTVSLTVK NAAGRSAVTK TEYIKVVAKP VSAFSAYPTS GKYPLNVKFT
DKSTGTPTKW KWDFGDGSKS FLQNPTHKYS KAGKYTVTLT VTNAVGINTA TKSKYITVTG
TSQAPTADFW GWPLSGKAPL KVTFTETSKG SPTSWKWDFG DGKYSTEKSP THTYSAAGTY
TVKLIATNEA GSSTKSKWKY IKVAK
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