Gene Mbar_A1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1404 
Symbol 
ID3627049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1731334 
End bp1731981 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content34% 
IMG OID637700293 
Producthypothetical protein 
Protein accessionYP_304943 
Protein GI73668928 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.132129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.334208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAA GATTTGATCT ACATATTCAC TCGAAGTATT CTTCAGATGG TGTTCTAGAC 
CCAAAGAAAA TTGTAAAAAC CGCGATTAAA AGAAACTTGA AGGGAATTGC TATTACCGAC
CATAATACGA TAAAAGGAGG ATTAAAAGCA ATAGAGTATG AAACTAAAGA TTTTAAGGTA
ATAGTAGGTT CAGAAATTAT GACTGATCAA GGAGAAGTTA TTGGACTTTT CCTTTCAGAA
GAAATAAAAT CAAATAATTT GATAAATGTG GTATCTGAAA TCAAAGCTCA AAATGGAATT
GTAATCGTTC CGCATCCTTT CGATGAAATG AGACGTTCAG CACTTCACCC AAAAGAAGAA
TGTGCTTCTC TAATCGACTG TATAGAAGGC TTTAATTCCA GATGTATTTT CCAAAAGTAC
AATGATAAAG CTGTTGAATA TGCTAATAAA CATAACTTAC CACTTGTCGC TGGAAGCGAT
GCCCATTTTG CAAATGAAAT TGGAAATGCG GGAATCGTTA CCCAGAGTGA AGATTTGCAA
GACGCGATAA TTAAAAATAA CATTGAGATA TTCGGAAGCC GATCAATGTT TATTAACCAT
GCTTTTACCA AGGGACTGAA AAGATGGCGA AAAATAAGAT ATGGATGA
 
Protein sequence
MTLRFDLHIH SKYSSDGVLD PKKIVKTAIK RNLKGIAITD HNTIKGGLKA IEYETKDFKV 
IVGSEIMTDQ GEVIGLFLSE EIKSNNLINV VSEIKAQNGI VIVPHPFDEM RRSALHPKEE
CASLIDCIEG FNSRCIFQKY NDKAVEYANK HNLPLVAGSD AHFANEIGNA GIVTQSEDLQ
DAIIKNNIEI FGSRSMFINH AFTKGLKRWR KIRYG