| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1399 |
|---|
| Symbol | |
|---|
| ID | 3627044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1724837 |
|---|
| End bp | 1725532 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637700289 |
|---|
| Product | transposase, putative |
|---|
| Protein accession | YP_304939 |
|---|
| Protein GI | 73668924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.225081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTC CGCTTATCCC AATAAACGAA GATTACAAAT GGAAATTGCT TTCAGAGATA
TTAAACGTTT TTGATTTGCG ATCCACTAAA CAAATTCTTT CACAATATGA GATACTACCT
CTCGAAAAAT CCATTCCTTC CCTGAAAATC GTCATTCTAA GCATGTATTT TTGCCTTGAG
ATTTCCTACG TAGTCAGAGA ATTGGAAGAA AAGAAGAAAT TACGGAAATT TATGAGAATC
AAGTTAGTGC CTTCTGAAGA TGAAGTCTAC AGCATTATGA GTAGCTTTGA TCCAGATCAG
TTCATCAACT TCGTTATTGG GTTACTTAAT AACATTTGTT CTCGTCATAA AAGAGGTATA
AGCCACATCA TAATCGATAG CACAGACATC AATCTTGACC TTAACTGGTT TAAGAGGAAA
ATTAGCAAAA AAATGCTAAA AGATCGAGAT TTTAAGTGGG GACACTCTAA ACATAGAGGT
TATTTCATAG GGATGAAGCT AAGTCTTGCT CTGGAATATC CAAGCTTAAA ACCGTTAGCA
TTCATTGTTA ATGAAGCAAA CATTAGTGAG TACACGGTTT ATCCACAGAT TCTTGAAGAG
CTAAATAGAA GAAGGAAAGA AAGAGCAGGA GACATACTTT ATTTCTACAG AAGTTATTAC
TCATATGAAA ATTATGTAAT AGGAATAGCA AAATAA
|
|---|
| Protein sequence | MKPPLIPINE DYKWKLLSEI LNVFDLRSTK QILSQYEILP LEKSIPSLKI VILSMYFCLE
ISYVVRELEE KKKLRKFMRI KLVPSEDEVY SIMSSFDPDQ FINFVIGLLN NICSRHKRGI
SHIIIDSTDI NLDLNWFKRK ISKKMLKDRD FKWGHSKHRG YFIGMKLSLA LEYPSLKPLA
FIVNEANISE YTVYPQILEE LNRRRKERAG DILYFYRSYY SYENYVIGIA K
|
|---|
| |