Gene Mbar_A1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1393 
Symbol 
ID3626420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1716556 
End bp1717212 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID637700283 
Producthypothetical protein 
Protein accessionYP_304933 
Protein GI73668918 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACAA TTGAAGTTTT GGAAGCTCTT CTATTAGGTT TTTCTGTAGG GCTTACAGGC 
GCACTTGTTC CGGGCCCAAT GCTTTTTGCA ACTATAGAGA TATCACTAAA AAAAGGCTGG
CTTGCAGGCC CACAGGTAGT ATTCGGGCAT ATGCTTGTGG AAGCTGTGCT CTACGTGCTG
ATTCTCGTAG GAGCTGCTTC GTTTGTTGAC AGTGGCATAA TTTCATTAAT CTTCCTAATA
GGAGGGCTTT CACTTCTGGT ATTTGGACTT CTTACCTTAA AAGAAGCACG AGCTACAGCT
TCTTCTACTC AGATTTCTCA GAATTCCTCA AGCTTGAAGC TGGTTTCCAA CCCTGCCCTA
ATAGGCCTGG TTACTTCAGT TTCGAACCCG TACTTCTGGA TCTGGTGGCT GACCGCTGGC
GGAGCTCTTG TACTTAAAGA ATATGAACTG GGAATTCTAA TTGCAATGGC TTATATGCTC
GGTCACTGGG CTGCAGACCT GGGCTGGTTT ACTGCCATAT CCGGCTCATT CGGACGTGGT
AAAACCCTGC TCTCCCAAAA AATGCATAGA TATATTCTCT ATACCTGCGG GGTATTCCTC
GTAGTTTTTG GGTTGTACTT CATGCTTAAT TGCAATCATT CGATTCATTT ATCCTGA
 
Protein sequence
MLTIEVLEAL LLGFSVGLTG ALVPGPMLFA TIEISLKKGW LAGPQVVFGH MLVEAVLYVL 
ILVGAASFVD SGIISLIFLI GGLSLLVFGL LTLKEARATA SSTQISQNSS SLKLVSNPAL
IGLVTSVSNP YFWIWWLTAG GALVLKEYEL GILIAMAYML GHWAADLGWF TAISGSFGRG
KTLLSQKMHR YILYTCGVFL VVFGLYFMLN CNHSIHLS