| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1376 |
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| Symbol | |
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| ID | 3627410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1700653 |
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| End bp | 1702974 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700266 |
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| Product | DNA helicase RepD |
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| Protein accession | YP_304917 |
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| Protein GI | 73668902 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.905642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA AGAACGGATA TATGCGGTAT TTTACGAAAC AGAGTTGCTA CCCTAACCAG
GCAGAAGCCA TGGAGAAGAT CCACTCGGCT CTCCTGAACG AAAAAACCGT ACTCTTTGAA
GGAGCATGTG GAACAGGCAA GACTTTAAGT GCACTTGCTC CTGCACTGAG TGTGGGGAAA
AAACTCAATA AGGTCGTTAT TATAGTCACT AATGTCCATC AGCAGATGGT TCAATTTATA
AATGAGGCAA GAGAGATTTC CCGGGATAAC GACATAAAAA CAATTGTTTT CAAGGGCAAG
GCTTCGATGT GCCCCAAAAA TCTCGATTAC GAAGAATGCA GGCTCAAAGG AGAAAATACC
TATGACCTCC TTGACCTTGA GCGGGAAATT TCTTCAAAAG AAAAAGAGCT CAAGGATGCC
TATGAGAAAT ACAAACGAAC AAAAGATCCT GCTCTTTATT CCCTGAGAAC TGAGCTTGAA
AAAGAACTCG AAGAAACTAA GAAAAAATCT CGGGCTTTGA GGAATAATTC CTGCCTGGAG
TTATATGAAG TCCTGAAATT TGAAGGTAAC GAATTTTCCA ACTGGCTTTT TTCCGACGTA
AGAAGCCCGG AAGAAATCCT GGAGTATGCC GAAGACCGGG ATATGTGCGG GTATGAACTG
CTGAAAAAAG AACTCAAAAA CGCCGAACTT CTAATCTGCA ATTTTCATCA TGTCCTTAGT
GCCGAAATTT TCATGATGCT GCTTAAATGG CTTGAACGAG ATCCTGAAGA TGTTATTCTG
ATTTTTGACG AAGCACATAA TATTGAGGCA TCTGCCCGTT CCCACTCTTC AACAATGCTC
TCGGAACTGA CTATTGAAAA AGCTCTTTCG GAAGTAGGTG AGACTCCTGA ATCTGACAAT
TCCCTTATGT TAGGAAAAGA AACTGACTCA GGAGGTGGCA TTCCCCTTGA CCAGGACTAT
GCGGCTAGAC TATATGCAAA AAAGCTGTTT ACCTGCCTCC TTACCGCTCT CAGGGATACA
TATGCTGCAA AATTGAAGTT CGGGGAAAGA AACAGGCTTG GAAAACACTG GCAGGACATT
AAGATCAGCG ACCCTTATGA GCGCTTTGAC ATCCTGAAAG CTCGCTTTTT GCGAGAAGCG
ATGAAGGAAG GCTTTGCAGA TGAAGAAAAA GTCCTCACAA GGCTGCGGGA GATTGGCGAG
TTTGGAGGAA GGCTGGAAGA GATTTATGCG GAAAATTACA AAAAAGGGCT TCTTGCAGTT
CCGAAACGTT CCCAGATCCG GTATGTTGCA GACTTTTTAT CCTCTTACCT CGTACTTTCG
GACAGGCAAA ACTACTATCC AATTCTGAAT GTGCGCAGAG ATTTCAAAAG CGATAGAATA
GCCGGCAGGA TTGAGCTTTT CACATGCATT CCTAAAAACG TGACTCAGCC TCTGTTTGAT
TCCATTTATG CAGCAGTACT CATGTCAGCT ACACTCCGAC CCTTCGAAAT GATAAAATCC
ACGCTTGGCA TCTCAAGGGA AGTGGAAGAG ATTTCCTATA GTACGACCTT TCCCAGGGAA
AGGAGGCTTA CACTTGCGGT TTCCATTCCT CCGCTTTTTG CAAAGAACCG TGACAGCCCG
GAAACGCTTG AGAGCATTAA AGAAGCCCTG CTTGCAGCTA CTGTTGCATC GCCAGGAAAC
GTGATTATTT ACTTCCAGAG CTATGCTGAA GCACTCCGCT ATACTAAACT CCTTGAACCT
GAACTTTCTA TTCCTATTTT CCTTGATGAG ACAGGGGTTT CAGCCCAGGA AATCCGAAAG
AAGTTTTTCA AAATCGGAGA GCAGGGAGGA AAAGCCTTAC TTATAACCTA TCTCTGGGGA
ACATTGAGTG AAGGTGTTGA TTTCAGAGAT TCCAGGGGCA GGACCGTGAT TATAGTGGGA
ATCGGATATC CGGCCCTAAA TGACCGAATC AAGGCTGTCG AATCTGCTTA TGATGAAGTT
TTCGGCTGTG GTGAAGGCTG GGAGTTTGCA GTTCAGGTGC CTACAATCAG GAAGGTCAGA
CAGGCAATGG GAAGGATAGT GCGTTCTCCA GACGACTATG GAGTAAGAAT TCTCCTTGAT
TCTCGCTACC AGGGCTCTCA GGTACGTAAA CTCGGTAAAT TTTCAGTTTT TGATTATTTC
CCGCCTGAAG AAAAGAGGGA GTTCATCGAC ATTGCACCCA AGGATGTGGG AAGTATCGTG
AAAGAATTTT TTGCACACGT CACGCATAGT AATCTCGAAA ATGAATCGAA GTCCCAGACT
TCAAGTCGTG TGGGTTTCGG AAGCCTTGCT GAAAAGCTTT GA
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| Protein sequence | MTQKNGYMRY FTKQSCYPNQ AEAMEKIHSA LLNEKTVLFE GACGTGKTLS ALAPALSVGK
KLNKVVIIVT NVHQQMVQFI NEAREISRDN DIKTIVFKGK ASMCPKNLDY EECRLKGENT
YDLLDLEREI SSKEKELKDA YEKYKRTKDP ALYSLRTELE KELEETKKKS RALRNNSCLE
LYEVLKFEGN EFSNWLFSDV RSPEEILEYA EDRDMCGYEL LKKELKNAEL LICNFHHVLS
AEIFMMLLKW LERDPEDVIL IFDEAHNIEA SARSHSSTML SELTIEKALS EVGETPESDN
SLMLGKETDS GGGIPLDQDY AARLYAKKLF TCLLTALRDT YAAKLKFGER NRLGKHWQDI
KISDPYERFD ILKARFLREA MKEGFADEEK VLTRLREIGE FGGRLEEIYA ENYKKGLLAV
PKRSQIRYVA DFLSSYLVLS DRQNYYPILN VRRDFKSDRI AGRIELFTCI PKNVTQPLFD
SIYAAVLMSA TLRPFEMIKS TLGISREVEE ISYSTTFPRE RRLTLAVSIP PLFAKNRDSP
ETLESIKEAL LAATVASPGN VIIYFQSYAE ALRYTKLLEP ELSIPIFLDE TGVSAQEIRK
KFFKIGEQGG KALLITYLWG TLSEGVDFRD SRGRTVIIVG IGYPALNDRI KAVESAYDEV
FGCGEGWEFA VQVPTIRKVR QAMGRIVRSP DDYGVRILLD SRYQGSQVRK LGKFSVFDYF
PPEEKREFID IAPKDVGSIV KEFFAHVTHS NLENESKSQT SSRVGFGSLA EKL
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