| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1369 |
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| Symbol | |
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| ID | 3627403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1689735 |
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| End bp | 1691714 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700259 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_304910 |
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| Protein GI | 73668895 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGGA TCAGGCTTGG GGCAGATTTT CTTTCGACAT ATGATGAAGG AATAAAAAAA
GAGTGGATTA TAGGAAATGG GCTTGGAGGA TTTGCTTCCT CTACAGTAAT TAACTCAAGA
ACAAGGACTT ATCACGGACT GCTTGTAGCA GCTCCAGCGA ATTATCCAGG GAGATATTTG
ATACTTTCTT CCCTTGATGA GGAAATTTCT ACCAACGAAG AAACGTATAA ACTCGCAACC
CATAAATATC CAGGAACTAT TTCTCCTGAG GGTTTTAATT ATCTTTCAGA ATTTGCTCAA
AACCCATTTC CTACCTGGGT TTACCATCCT GGTGGTATAA CCGTAAAGAA AACAGTCTTC
ATGGTTCGCA ACAGTAACAC AACCTGTGTT CTCTATGATA TAAAATCCAG GAGAGAGGAA
GCTTTACTAA GAATTTTTCC TCTAGTAAGT TCAAGAGACT TTAATATCAC TGCCCGCGCC
GGATACCTTT CCTTTACCCA GGAAGCTACT CCTGCTGGAG TAGAAATGGC AAGCTCTAAT
GGTTTTACTT TCTCGCTTTC ATCCGACCTC CAGTATCATC CTAATCCCAC ATGGTACTAT
AACTTAGAGT ATGATGCTGA AAAAGAACGG GGACTTAACT CTGAGGAAGA TAACTTTAGT
CCAGGGTATT TTGAAAGCAA GATCGGATTG GGAGATTTCC GTTTTTTTGT TGCTGCTTCA
ACAGGAGATG TTTCTTCTTT TACTCTCAAG CAAGTTGATA AACTCCGTAT CAGGGAAGCA
AATCGGCAGA ACCTTCTTGT TCTTGATTCA AAACTTATTG ATCCTTTTGC TCTTAAACTT
ATCAGGGCGA CTGATACTTT CGTAGTGAGA AGCCATATTT CAGGTGAGGA TACGGTAATT
GCAGGATATC ACTGGTATTC TGACTGGGGA AGGGATACCA TGATTTCTCT GCCTGGCTTA
CTTTTAGTTC CTTATCGTTT CGAGGAAGCA AGAACCATTC TCAATTATTT TGCTAGGTAC
TGTCGGAGAG GTTTAATCCC TAACACTTTC CCGGCTTTTG GAGGAGAGCC AATTTATAAT
ACAGTGGATG CTCCTCTCTG GTTTATTCAT GCCCTTAGCC GCTATTTCGC ATATACAAAC
GATTTCCTTT TCCTCTCGGA TATCTGGGAC ACAGTAGTTA ACATTATAGA TCATTACTTT
ACAGGCACAG ATTTTGGAAT CGGCATGGAT TCAGATTATC TCATCCAGCA GGGACCCCAG
CTAACCTGGA TGGATGCTAA AATCGGGGAA TGGGCAGTGA CACCAAGGGC AGGTAAAGCC
TGTGAGATAA ATGCTCTCTG GTATAACGCC CTGAAAACTG CTTCTTACCT TGGTACTCTT
CTCGGTGAAG AGGTCTCCCC ATACGAAACT CTTGCAACTG GTGTTGTCTC GAGTTTTGAG
AACACTTTCT GGAATCCGGA AACCAACTGT CTCTTTGACC TCGTATATAA GGATGAAACA
GGAAACGAGG TTAAAGACTC TGCCATCCGA CCTAACCAGA TCTTTGCCGT GTCCCTACCT
TATACTATGC TCCCTCCTGA AAAAGAAAAA GCGATTGTGG ACAGAGTTGA AAAAGACCTT
TTGACCCCCT TTGGGCTTAG AACTCTCTCG AGAGACCACT CCTTATATAA AGGGCAATAT
CATGGAGATG CCTTAACCAG AGATACCGCT TACCACAATG GAACCGCCTG GCCCTGGCTC
CTTGGAGCTT ATGTGAAAGC CTACAGGAAA GTCAATAATT ATTCGGAAGA TAGTCTTGAG
AATATGCGGA TTCTTCTTGA AGGCTTTGAT ATGCAGCTTG AAACAGCAGG TATCGGTTCC
ATTTCTGAAG TATTTGATGG TGACTATCCT CACTCTCCTG GAGGCTGTAT CGCCCAGGCC
TGGAGCGTTG CGGAAATTTT GAGGGCATAT GTAGAGGATG TACTTGAGAT CAAACCTTGA
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| Protein sequence | MSGIRLGADF LSTYDEGIKK EWIIGNGLGG FASSTVINSR TRTYHGLLVA APANYPGRYL
ILSSLDEEIS TNEETYKLAT HKYPGTISPE GFNYLSEFAQ NPFPTWVYHP GGITVKKTVF
MVRNSNTTCV LYDIKSRREE ALLRIFPLVS SRDFNITARA GYLSFTQEAT PAGVEMASSN
GFTFSLSSDL QYHPNPTWYY NLEYDAEKER GLNSEEDNFS PGYFESKIGL GDFRFFVAAS
TGDVSSFTLK QVDKLRIREA NRQNLLVLDS KLIDPFALKL IRATDTFVVR SHISGEDTVI
AGYHWYSDWG RDTMISLPGL LLVPYRFEEA RTILNYFARY CRRGLIPNTF PAFGGEPIYN
TVDAPLWFIH ALSRYFAYTN DFLFLSDIWD TVVNIIDHYF TGTDFGIGMD SDYLIQQGPQ
LTWMDAKIGE WAVTPRAGKA CEINALWYNA LKTASYLGTL LGEEVSPYET LATGVVSSFE
NTFWNPETNC LFDLVYKDET GNEVKDSAIR PNQIFAVSLP YTMLPPEKEK AIVDRVEKDL
LTPFGLRTLS RDHSLYKGQY HGDALTRDTA YHNGTAWPWL LGAYVKAYRK VNNYSEDSLE
NMRILLEGFD MQLETAGIGS ISEVFDGDYP HSPGGCIAQA WSVAEILRAY VEDVLEIKP
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