| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1361 |
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| Symbol | alaS |
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| ID | 3627395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1677210 |
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| End bp | 1679981 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637700251 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_304902 |
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| Protein GI | 73668887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAG ATGAATATCA ACTTGAATTT TTCAAAAATA ACGGGTTCGT CCGGAAGCAG
TGCCAGTCAT GTGGCAAATT CTTCTGGACA CGTGACCTTG ACCGAAAGAC ATGCGGAGAT
GCGCCCTGCG ACCCTTATAC CTTTATAGGA AACCCGATTT TTTCCAGGGA ATTTGATATC
TCCCAGATGC GTGAGTATTA CCTCTCATTC TTTGAGGAGA AAGGGCACAC AAGGATCAAC
CGTTATCCTG TAGTTGCCCG CTGGAGAGAT GACCTTTATC TTACCATTGC GTCCATTGCA
GACTTTCAGC CTTTCGTAAC CTCAGGACAG GTTCCCCCAC CTGCAAATCC CCTAACGATT
TCCCAGCCCT GCATTCGCCT GAACGACCTG GACTCAGTAG GCAGGAGTGG GCGCCATCTT
ACAACGTTTG AAATGATGGC ACATCACGCC TTCAATAAAA GGGATCACGA AATCTACTGG
AAGGAACATG CCATGGAACT TTGTGATGAA CTCCTTACCT CACTTAAATT AGATCCCCTG
GCTGTAAGTT ACAAGGAAGA GCCCTGGGCA GGCGGAGGAA ATGCAGGGCC CTGCGTTGAG
GTTCTTGTGC ACGGGCTTGA GCTTGCTACT CTTGTTTTCA TGGACCTGAA AGCCGACAAA
AAAGGTGACG TCCTCATCAA AGGTGAGACC TATTCGAAGA TGGATAACTA CATCGTGGAT
ACAGGATACG GGCTCGAACG TTTCGTCTGG GCTTCAAAGG GTTCACCTAC CATCTATGAT
GCACTTTTCC CTGGCATAGT AAACGAACTC ATGGGGCTTG CAGGACTTGA GCATGAACTG
GACAACTCCG AATATGCAAA TATTCTGGCC CAGAATGCTC GGCTTGCAGG GTTTATGGAT
GTAAGTGAAC AGTCAAACCT TCTGGAACTC AGGAAAAAAG TCGCTTCAAG CATCGGAATG
ACCGTGGATA AACTCTCGGC TATAATGGAA CCTGTAGAAA AGGTCTATGC AATTACTGAC
CATACACGCT GTCTGACTTT CATGCTTGGA GACGGGATTA TTCCCTCGAA TGTCAAAGCA
GGGTATCTTG CAAGGCTTGT CATCAGGCGG ACTTTACGCA TGATGGACGA CCTTGACATC
CGTATCCCAC TTTCCGAGAT TATGGATATG CATATCAAGA ATATGCCGGA GTATCCCGAA
TTCAGGGAAA ATTTCCCGGT TATACAGGAT ATCCTGGTGT CTGAAGAAGA GAAGTTCCGT
AATACAATGG AGAAAGGCCG CAGGATAATT CAGAAATCGG CATCTCATTT CAAGAAAACC
GGGGAAAAGA TTCCTTTATC TCAGTTAACT GAACTTTACG ATTCCCACGG AATCCCACCC
GAGATGGCAA AAGAAGTAGC ATCCGAAATC GGAGTGGGCG TAGAGTTCCC TGACAACTTC
TATTCCATTA TTGGTGAACT GCATAACAAG GCTGAGGAAA AGGAAGAAGA AGTAGTTCCA
TTTGCAGATC GGCTTAAGCA CCTCCCGAAG ACAAAGCGCA GCTTCTATGA CGAGCCCACG
CGCCTGGAAT TCGAGGCCGT TGTACTGGAT ATCTTTGACA ACAATATAGT GCTGGATAAC
ACCTTTTTCT ACGCCGAAGG CGGTGGACAG CCTGCAGATA TGGGAACAAT CGCTACCGCG
TATGCAGTAT ACAAGGTTGT GGACGTCCAG GTCTACGACG GCGTAATAGT ACATACCATA
GAGAACCCTG ACGGGAATCT TGATATCCGC AAGGGTGACA TTGTCAATGG TAAAGTGGAC
GAAAAGCGCA GGATGACCCT TGCCAGACAC CACACGGCAA CCCATATCGT AAACGATGCA
GCCAGGAAAG TTCTTGGAAC ACACATCTGG CAGGCCGGTG CCCAGAAGTT TGAGGACCAC
TCAAGGCTTG ACCTTTCTCA TTACAAGCAT ATCTCTCCTG ATGAACTGAA GCAGATAGAG
CTCCTGGCAA ATCGCATGGT TATGGAAAAC AAGCGTGTTG TTACCGAGTG GATGTCAAGG
ACTGAAGCCG AGCAGGAATA CGGCTTTGGG CTCTATCAGG GTGGAGTGCC TCCAGGAGAA
AAAATTAGAG TTGTAAAGGT CGGAGACGAT GTTGAGGCCT GTGCAGGTAC GCACTGTGTC
AGTACAGGAG TTGTCGGCCC GATTAAGATC CTGAGAACCG AGAGGATCCA GGATGGAGTT
GAAAGAGTTG AGTTTGCAGC AGGAGTTGCA GCCGTACGTG CCATGCAAAA GATAGATTCG
CTTCTGTCAG ATTCCGCAAA GACCCTTAGT GTGCCTCCAG AGCAGCTTCC TGCAAGTGTT
GAGCGTTTCT TTGGGGAATG GAAAGACCTC AAGAAAGAAA ACGAGAAACT CAAGGAAGAA
ATTGCCCGCG CCAGGGTTTA CAGGCTGCTT GGAGGAGCTT CTGAGGTTGC AGGCCTCAAG
GTTATTGCCG AATTCATTCC CGAAGCCGAT TCCCTTGAAC TCCAGAAGAC CGCTACTGAA
CTCCTGAAAC ATGAAGACGT GGTAACTCTT CTCGCAAGTG ATGCCGAAGG AGTTAAACTC
GTTGCATCTG CCGGGCAAAA AGCCTTAAGT TGTGGAATCA ATGCCGGCAG CCTTGTCCGC
GAGATGTCGA AGCTTGTAAG CGGCGGCGGA GGCGGAAAGC CTGCCCTTGC TATGGGCGGT
GGAACCGACC CCTCAAAAAT TCAGGACGCG CTTGCCCGTG GGCTTGAACT CGTAAAAGAA
GCTTGCAAAT AA
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| Protein sequence | MLEDEYQLEF FKNNGFVRKQ CQSCGKFFWT RDLDRKTCGD APCDPYTFIG NPIFSREFDI
SQMREYYLSF FEEKGHTRIN RYPVVARWRD DLYLTIASIA DFQPFVTSGQ VPPPANPLTI
SQPCIRLNDL DSVGRSGRHL TTFEMMAHHA FNKRDHEIYW KEHAMELCDE LLTSLKLDPL
AVSYKEEPWA GGGNAGPCVE VLVHGLELAT LVFMDLKADK KGDVLIKGET YSKMDNYIVD
TGYGLERFVW ASKGSPTIYD ALFPGIVNEL MGLAGLEHEL DNSEYANILA QNARLAGFMD
VSEQSNLLEL RKKVASSIGM TVDKLSAIME PVEKVYAITD HTRCLTFMLG DGIIPSNVKA
GYLARLVIRR TLRMMDDLDI RIPLSEIMDM HIKNMPEYPE FRENFPVIQD ILVSEEEKFR
NTMEKGRRII QKSASHFKKT GEKIPLSQLT ELYDSHGIPP EMAKEVASEI GVGVEFPDNF
YSIIGELHNK AEEKEEEVVP FADRLKHLPK TKRSFYDEPT RLEFEAVVLD IFDNNIVLDN
TFFYAEGGGQ PADMGTIATA YAVYKVVDVQ VYDGVIVHTI ENPDGNLDIR KGDIVNGKVD
EKRRMTLARH HTATHIVNDA ARKVLGTHIW QAGAQKFEDH SRLDLSHYKH ISPDELKQIE
LLANRMVMEN KRVVTEWMSR TEAEQEYGFG LYQGGVPPGE KIRVVKVGDD VEACAGTHCV
STGVVGPIKI LRTERIQDGV ERVEFAAGVA AVRAMQKIDS LLSDSAKTLS VPPEQLPASV
ERFFGEWKDL KKENEKLKEE IARARVYRLL GGASEVAGLK VIAEFIPEAD SLELQKTATE
LLKHEDVVTL LASDAEGVKL VASAGQKALS CGINAGSLVR EMSKLVSGGG GGKPALAMGG
GTDPSKIQDA LARGLELVKE ACK
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