Gene Mbar_A1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1330 
Symbol 
ID3627442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1640499 
End bp1641566 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content46% 
IMG OID637700221 
ProductN2-methylguanosine tRNA methyltransferase 
Protein accessionYP_304872 
Protein GI73668857 
COG category[L] Replication, recombination and repair 
COG ID[COG1041] Predicted DNA modification methylase 
TIGRFAM ID[TIGR01177] conserved hypothetical protein TIGR01177 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.315731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATACG CTTTTGAACT TTCTGGAGAA CATGAAGAAC TGCCCGCTGC CGAAGTATTT 
GCCTGCCTCA GAATTGAGGG ACTTGATTTT CGGACCCATA CTATTATTGA CCAGTGCTTG
GTAGTGGAAA TAACTGGCAA AGAAGAGGAT GTGGAAAAAA TCCTTCGAGG CCCGATAACT
GACAGGCTGG CAATGACCCA CCATATCCTG AAGGTTGTTG GGATCTCCGA AAATACTCCG
GATGCAATCC TGAAACTTGC AGAAGCCTTT GATTCATCAG GCTACATCAG AGAAGGACAA
AGTTTTGTGG TCAGAGCAAA ACGAATCAAA CACCATGTGG ATTTTCCGGG CGAGTTTCTT
GAACAGAAAG TAGGAGGATG CATTTACAGG AAAGGCTTTC GGGCAAACCT GAAAGACCCG
GACGTGGAGT TCAGAGTGAT CCTGAGTGAA AAAGCTGTGT TCGGAACTCT CCTGTCCTCT
ATCGACAGAA GTGCATATGA AGCCAGAAAC CCCCAGAATA AACCTTTTTT CCATCCTGGT
GTCCTTATGC CGAGGGTTGC CCGCGCCCTC GCAAACCTCT CTGGAATAAA GCCAGGAGAA
CTCTTTATGG ACCCATTTTG CGGCACTGCA GGAATTATTA TTGAAGCCGG GCTTATGGGA
GCAAGGGTTA TAGGAATCGA TGCTCAGGAA AAACTTGTTA AGGGTGCCCA TATGAACCTT
GAAGCCTTTA AACTGGATTA CGCCCTGATG GAAGGAGATG CCTGTAGGGT TCCGTTAAAA
GAAGAAACAA TAAATGCAGT CGTCACTGAC CCGCCCTATG GCAGATCGGC AGCAATTCTC
GGAGGGTCCT TGGAAGAACT CTATTCCTGT GCTCTTAGTG AGATCGAGCG TGTCCTTAAG
CCCGGAGGCA TCGCAGTTGT AGTTTCGGAT AAAGCTGCAG CGGAATATGG GGAAAAGGCA
GGGCTTAAGG TTCTTAAGAT TTATTCCCAG AGAGTACATC GAAGCCTTAC CCGGACAATA
ACTATTTTTC AGAAAAAATT AAAAAATGAG AATGGGAAGC GGGAATGA
 
Protein sequence
MLYAFELSGE HEELPAAEVF ACLRIEGLDF RTHTIIDQCL VVEITGKEED VEKILRGPIT 
DRLAMTHHIL KVVGISENTP DAILKLAEAF DSSGYIREGQ SFVVRAKRIK HHVDFPGEFL
EQKVGGCIYR KGFRANLKDP DVEFRVILSE KAVFGTLLSS IDRSAYEARN PQNKPFFHPG
VLMPRVARAL ANLSGIKPGE LFMDPFCGTA GIIIEAGLMG ARVIGIDAQE KLVKGAHMNL
EAFKLDYALM EGDACRVPLK EETINAVVTD PPYGRSAAIL GGSLEELYSC ALSEIERVLK
PGGIAVVVSD KAAAEYGEKA GLKVLKIYSQ RVHRSLTRTI TIFQKKLKNE NGKRE