Gene Mbar_A1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1304 
Symbol 
ID3627713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1613684 
End bp1614475 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637700194 
Productnicotinate-nucleotide pyrophosphorylase (carboxylating) 
Protein accessionYP_304847 
Protein GI73668832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.424331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACC TTTTTGAGCT GTATTTTTAT GAAGACTGTC CTTATCAGGA TGAAAGCGCA 
GAACTGCTCA GGCTTGAAGG CAGGGGGAAA ATGAGGATTG TTTCAAGAGA AAACGGTGTA
TGTGCCTGCG CCAGCGACCT GGCAGAGTAT TATGAAAGAA AAAACATGAA GACCCTGAAT
TACCTTCGAG ACGGAGAGAC TTTCAAGCCC GGGGATGCAA TTTTCGAAGC TGAAGGAGAC
CTTAAACTTC TGTTCAGGTA CTGGAGGGTT TCCCAGACTT TCCTCACCAT CATGTGTGCA
ATTGCCACGA AGACTGCCTC TCTCGTTAGT GCAGGCCGAA AGGCAAACCC TGACATTATT
ATCGCAACAA GCCGTAAGAC CCACCCCGGA TCGAGGATAT TTGAGATTAA AGCTGTCCGG
GCAGGCGGAG GAGATATCCA TAGAAACTCC CTCAGCGATT CTATCCAGTT CAGCCAGAAC
CACCTGGAAG TTGTAGGCGA ACTGGGAAAA CTCAGGGCTA TTAAAAAGAT AGAAATCGAA
CCCAGAACGA GAGAAGAAGC GTTCAAATAT GCCGGAATGT CGGATATTAT GCTTCTTGAC
CACATTTCTC CGGAAGAACT GCGGGAACTC GGGCCCGAAC TTAAGAAACT AAATCCAAAG
CTTGAACTTG CAGTGGGAGG AATCAAAGGG CCCATGATTC CTGAATACGC TCCTTTTGTA
GATATTATCG TTATAAGCGC TCCCTATTAT GCAAATCCCC TTGACTTTAC AACAAAAATG
GAAAGAATTT AA
 
Protein sequence
MIDLFELYFY EDCPYQDESA ELLRLEGRGK MRIVSRENGV CACASDLAEY YERKNMKTLN 
YLRDGETFKP GDAIFEAEGD LKLLFRYWRV SQTFLTIMCA IATKTASLVS AGRKANPDII
IATSRKTHPG SRIFEIKAVR AGGGDIHRNS LSDSIQFSQN HLEVVGELGK LRAIKKIEIE
PRTREEAFKY AGMSDIMLLD HISPEELREL GPELKKLNPK LELAVGGIKG PMIPEYAPFV
DIIVISAPYY ANPLDFTTKM ERI