Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1304 |
Symbol | |
ID | 3627713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1613684 |
End bp | 1614475 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637700194 |
Product | nicotinate-nucleotide pyrophosphorylase (carboxylating) |
Protein accession | YP_304847 |
Protein GI | 73668832 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.424331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGACC TTTTTGAGCT GTATTTTTAT GAAGACTGTC CTTATCAGGA TGAAAGCGCA GAACTGCTCA GGCTTGAAGG CAGGGGGAAA ATGAGGATTG TTTCAAGAGA AAACGGTGTA TGTGCCTGCG CCAGCGACCT GGCAGAGTAT TATGAAAGAA AAAACATGAA GACCCTGAAT TACCTTCGAG ACGGAGAGAC TTTCAAGCCC GGGGATGCAA TTTTCGAAGC TGAAGGAGAC CTTAAACTTC TGTTCAGGTA CTGGAGGGTT TCCCAGACTT TCCTCACCAT CATGTGTGCA ATTGCCACGA AGACTGCCTC TCTCGTTAGT GCAGGCCGAA AGGCAAACCC TGACATTATT ATCGCAACAA GCCGTAAGAC CCACCCCGGA TCGAGGATAT TTGAGATTAA AGCTGTCCGG GCAGGCGGAG GAGATATCCA TAGAAACTCC CTCAGCGATT CTATCCAGTT CAGCCAGAAC CACCTGGAAG TTGTAGGCGA ACTGGGAAAA CTCAGGGCTA TTAAAAAGAT AGAAATCGAA CCCAGAACGA GAGAAGAAGC GTTCAAATAT GCCGGAATGT CGGATATTAT GCTTCTTGAC CACATTTCTC CGGAAGAACT GCGGGAACTC GGGCCCGAAC TTAAGAAACT AAATCCAAAG CTTGAACTTG CAGTGGGAGG AATCAAAGGG CCCATGATTC CTGAATACGC TCCTTTTGTA GATATTATCG TTATAAGCGC TCCCTATTAT GCAAATCCCC TTGACTTTAC AACAAAAATG GAAAGAATTT AA
|
Protein sequence | MIDLFELYFY EDCPYQDESA ELLRLEGRGK MRIVSRENGV CACASDLAEY YERKNMKTLN YLRDGETFKP GDAIFEAEGD LKLLFRYWRV SQTFLTIMCA IATKTASLVS AGRKANPDII IATSRKTHPG SRIFEIKAVR AGGGDIHRNS LSDSIQFSQN HLEVVGELGK LRAIKKIEIE PRTREEAFKY AGMSDIMLLD HISPEELREL GPELKKLNPK LELAVGGIKG PMIPEYAPFV DIIVISAPYY ANPLDFTTKM ERI
|
| |