Gene Mbar_A1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1287 
Symbol 
ID3627696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1595272 
End bp1595874 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID637700177 
Productformylmethanofuran dehydrogenase, subunit E 
Protein accessionYP_304830 
Protein GI73668815 
COG category[C] Energy production and conversion 
COG ID[COG2191] Formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATAAAA ATTCAGATGA AGAAAAACAC CAGATGGAAA CGATTCTGAA GCAGGTAAAG 
GATCCCGAAC TACTTTCACA AATCAAAAAA GTAGTCCCCT TTCATGGCTT CCTGACCTCT
GGGGCATTAA TCGGTATCCA GATGCTCAAT ATCGCAAGAC GGGAGCTTGA TGTCCGGGAA
GGGGAACGCA TATACGTGAC ATGCGAAACA AAAAGCTGCA TGCCTGACCC ATTCCAGATC
CTTGCTGGAG CTACCATCGG AAACAATGGG TTAAAAATCA TGAACTTTGG AAAGATGGCG
GTCACAGTAA ATAAACAGGC GCCTGAGGGA GCTAACAGCA TAAAAGGGAT CCGAATTATT
CTCGACCCTG AAAAAACGAA GGATTATCCC AAACTCCACG CCTGGTTCCT GAACACTGAA
AAGCTTCCTC ATGTGGAGGT TTTACCAATC CTCCTGGCTG CAGGAGATAA AGTGTATTCC
TGGAAATTTG TGGACATCGA TGTTCCGGTT CGAAGGAAGA AGAGGATACA GTGCTGTAAA
AATTGCGGTG AAATGTTTAT TCAACATGAC AACGAGCTGT TGTGCGGCGG TTGCACAGAA
TAA
 
Protein sequence
MHKNSDEEKH QMETILKQVK DPELLSQIKK VVPFHGFLTS GALIGIQMLN IARRELDVRE 
GERIYVTCET KSCMPDPFQI LAGATIGNNG LKIMNFGKMA VTVNKQAPEG ANSIKGIRII
LDPEKTKDYP KLHAWFLNTE KLPHVEVLPI LLAAGDKVYS WKFVDIDVPV RRKKRIQCCK
NCGEMFIQHD NELLCGGCTE