Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1271 |
Symbol | |
ID | 3627758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1579730 |
End bp | 1580392 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700161 |
Product | hypothetical protein |
Protein accession | YP_304814 |
Protein GI | 73668799 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.384497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAG TAAAGATTGG AAATGTTACA ATTCAGTGGT TGGGTCACTC TGGCTTTTTA CTTGAAGGGG ATGAAAAGAA AATTTATATT GACCCCTACG ACCTCAGCGA AGAGCCAGCT TTTGAAGATA AAGCTGATAT CCTGTTGATT ACTCATGAGC ACTTTGACCA CTGCAGCCCT GATGATATCC GAAAGGTTCG GCGGTCGGAC TCAACCACTC TGATACCTGA AAGTTTATCC CTGCAATTCA AAGGGGACGC AAGGCGGGTT GCTGAGGGAG ATGTGCTGGC CGACGGGCTT GAAATAAAGG GAACCAGAAT TGAAGTAGTT CCGGCTTATA ACCTCGATAA ACCCTATCAT CCCCATGGAT TGGGAGTGGG GTATATAGTA GAACTTGGAG GAATCCGGAT CTATCATGCC GGAGACTGCG ATTTTATTCC TGAAATGAAA AATATCAGGG TCGATGTCGC CCTTTTGCCT ATAGGGGGTA CGTATACAAT GGATGAAGAG GAAGCAGCAA GTGCAGCCGC AGCAATTTCC CCAAAAGATG TAATTCCGAT GCACTACGGA AAGCCAGACA TAACAGGTGG AGATCCCGAA AAGTTTAAAG CTCTTGTACA CGGCAAAAAC CCAGATATTA ATGTGATTAT TCTTGATTCC TGA
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Protein sequence | MNRVKIGNVT IQWLGHSGFL LEGDEKKIYI DPYDLSEEPA FEDKADILLI THEHFDHCSP DDIRKVRRSD STTLIPESLS LQFKGDARRV AEGDVLADGL EIKGTRIEVV PAYNLDKPYH PHGLGVGYIV ELGGIRIYHA GDCDFIPEMK NIRVDVALLP IGGTYTMDEE EAASAAAAIS PKDVIPMHYG KPDITGGDPE KFKALVHGKN PDINVIILDS
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