Gene Mbar_A1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1243 
Symbol 
ID3628013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1543911 
End bp1546007 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content39% 
IMG OID637700133 
Producthypothetical protein 
Protein accessionYP_304788 
Protein GI73668773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.537095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAT CGAATAGTTG GAGAAAAACT GTAGTTTATA CTGCATTAAT ACTCTGCCTG 
ATCAGTTTTC TGTTGATAGT ACATGCTGGA TATGAGTATT ATAGCAACAA TACAGACGAT
AAAATTCTGG AAAAGGCAAA GGGAGATGCG TACAACAAAG CCAGCGTTGT TTTGGAAAAT
ATATCGGGCG AACTTAATTC TACGAGCCTC CTGACTGACG GAATTGCAAA GGAACTGAGT
TCTGGAAAAC TGAAAAACGA TTCCATTATC AGGCAGCATA TCCTGGATGA AATGGAGGGT
AATCCAAATA TTTTCAGCAT TGTCATTGCT TATTCCCCTG CTTATTATGG GAAGCTTCAT
TCGCTTCATT TAAAAAAGAA TGGTTCAAAT ATCCTGGAAT TTCCAATCCT GTACGACTAT
ACGAACAATA ATGAAGAAAC AACGGCCTGG TATACTAATG CCATGAAAAA GAAGTGTGGA
GTCTGGAACC GGCCTTATTT CGGAGTGGCA GATGGTACCT ATCTGATAGA TTATTCAACT
CCATTTTATC TTGCAGAATT CAAAAACGGG AGCGAAGTTG CAGGAGTTGT GTGTGCAAGC
CATTCTATTG AAGGAATAAG GACGCAGATA GGAAGCCTTG ATCTTGGAAA TACGGGTTAC
GGTTTTATTT TCTCTGAGGA AGGATTGATC ATTTCCTATC CTGTTCAGGA TTATCTACTC
AGAAATATTC ACAAACTGGC AAAAGAAGAT ACCGAACTTA ACCTTATAGG CGAGAACATA
AGCAAAAACA TGACAGATCG AGTTGTAGAA AATGATCGGA CAGGGCAATC TTCCTGGGTA
TTTTACAAAA ATATCCGTTC TACAGACTGG ATACTGGGGA CTGCCCTTCC TCAAGAAGAA
ATTTTGCTGA ATAAAGATAT AGAGCAGGAT CGCTCTATTA TCCAGGTCAT GCTTTTAACT
TTTGCCTTTT TATTCTTCCT GTCCCTATTT TTTGTCTCCA TTTACAGGTA TGACGATAGA
AGTCTCTGGC TGTTAGCTCT TGTTTTTTCA TCCCTCTGCA TCCTGGGAAT GGGCATCATT
TGGCACTTTA CTTTAAATGA ATCGTCGATT GAAGTCGAGA ATGGTAATAT TGTTGTTTTC
GACATAGCAG ATGTTGAAAC AGTACTGCTG AATTCCGATA CGAACCCGAA AGCCTTCAGG
ATTCCCACGG GGGTCTTTAT CCAGTCCATA GAGTTTTCGA CTTCTAATGA CATCACCATG
ACTGGGTATG TCTGGCAAAA TATTTCAGGG CTGAGTGTTG AGAAGGCTTC GCCGAGATTT
AGTTTCCCGG AATCAAAAGA AAGCACAGTT GAAAGAGACT ATATGGATGA GGACAAGAAT
ATCGTAGGTT GGCGTTTCAC GACTATTCTG CGCCAGCAAT TCGATTATTC CAGATACCCA
TTTGACGAGG AAAATATATG GATTAAATTC TGGAACAACA CTTCTGAAGA AAGTGTTCTG
GTTCCAGATT TTGATTCCTA TGACAGCCTG TCTCCGGAAA AACTTATCGG CCTAGAAAAC
TCTCTCGTGC TTGAAGGCTG GAAGCCACAA AAAACTTTTT TCAGTTACAG GATGAATTCC
TATAACACCA ATTTTGGGGT AAAAGATTTT AAACATAGGA ACTTATCCGA GCTTTACTTC
AACGTTGCTA TCAAAAGAGA CCTAAAGTCC CCATTTGTTT CCGACTTGCT ACCCATAATA
GTAGTAGCCA TCCTTCTATT TGTGGTGCTT TTGATAACGA CCAGGGAAGA AGAGAAAAAT
CAGTTCGGGT TTAAATCTTC GGGAGTCTTG ACCTATTGTG CCTCTCTCTT TTTTGTTCTT
ATTGTTTCCC ATGCCTCCCT CAGGGCTAAA ATCCCTACGA ATTGTATGAT TTACCTTGAA
TATTTCTACC TTATACTGTA TATGGCAATT CTAGGTGTAT CTCTGAATTC AATAGTATTT
GCGTCCCATA TGAATATCCC TTTTATTGAT ACAAAGGACA ATCTGTATGT GAAAGTGCTT
TACTGGCCTA TAATTACGGG ATTTCTGTTG ATTATTACGC TCCTGAATTT CTATTGA
 
Protein sequence
MTASNSWRKT VVYTALILCL ISFLLIVHAG YEYYSNNTDD KILEKAKGDA YNKASVVLEN 
ISGELNSTSL LTDGIAKELS SGKLKNDSII RQHILDEMEG NPNIFSIVIA YSPAYYGKLH
SLHLKKNGSN ILEFPILYDY TNNNEETTAW YTNAMKKKCG VWNRPYFGVA DGTYLIDYST
PFYLAEFKNG SEVAGVVCAS HSIEGIRTQI GSLDLGNTGY GFIFSEEGLI ISYPVQDYLL
RNIHKLAKED TELNLIGENI SKNMTDRVVE NDRTGQSSWV FYKNIRSTDW ILGTALPQEE
ILLNKDIEQD RSIIQVMLLT FAFLFFLSLF FVSIYRYDDR SLWLLALVFS SLCILGMGII
WHFTLNESSI EVENGNIVVF DIADVETVLL NSDTNPKAFR IPTGVFIQSI EFSTSNDITM
TGYVWQNISG LSVEKASPRF SFPESKESTV ERDYMDEDKN IVGWRFTTIL RQQFDYSRYP
FDEENIWIKF WNNTSEESVL VPDFDSYDSL SPEKLIGLEN SLVLEGWKPQ KTFFSYRMNS
YNTNFGVKDF KHRNLSELYF NVAIKRDLKS PFVSDLLPII VVAILLFVVL LITTREEEKN
QFGFKSSGVL TYCASLFFVL IVSHASLRAK IPTNCMIYLE YFYLILYMAI LGVSLNSIVF
ASHMNIPFID TKDNLYVKVL YWPIITGFLL IITLLNFY