Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1243 |
Symbol | |
ID | 3628013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1543911 |
End bp | 1546007 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637700133 |
Product | hypothetical protein |
Protein accession | YP_304788 |
Protein GI | 73668773 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.537095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCAT CGAATAGTTG GAGAAAAACT GTAGTTTATA CTGCATTAAT ACTCTGCCTG ATCAGTTTTC TGTTGATAGT ACATGCTGGA TATGAGTATT ATAGCAACAA TACAGACGAT AAAATTCTGG AAAAGGCAAA GGGAGATGCG TACAACAAAG CCAGCGTTGT TTTGGAAAAT ATATCGGGCG AACTTAATTC TACGAGCCTC CTGACTGACG GAATTGCAAA GGAACTGAGT TCTGGAAAAC TGAAAAACGA TTCCATTATC AGGCAGCATA TCCTGGATGA AATGGAGGGT AATCCAAATA TTTTCAGCAT TGTCATTGCT TATTCCCCTG CTTATTATGG GAAGCTTCAT TCGCTTCATT TAAAAAAGAA TGGTTCAAAT ATCCTGGAAT TTCCAATCCT GTACGACTAT ACGAACAATA ATGAAGAAAC AACGGCCTGG TATACTAATG CCATGAAAAA GAAGTGTGGA GTCTGGAACC GGCCTTATTT CGGAGTGGCA GATGGTACCT ATCTGATAGA TTATTCAACT CCATTTTATC TTGCAGAATT CAAAAACGGG AGCGAAGTTG CAGGAGTTGT GTGTGCAAGC CATTCTATTG AAGGAATAAG GACGCAGATA GGAAGCCTTG ATCTTGGAAA TACGGGTTAC GGTTTTATTT TCTCTGAGGA AGGATTGATC ATTTCCTATC CTGTTCAGGA TTATCTACTC AGAAATATTC ACAAACTGGC AAAAGAAGAT ACCGAACTTA ACCTTATAGG CGAGAACATA AGCAAAAACA TGACAGATCG AGTTGTAGAA AATGATCGGA CAGGGCAATC TTCCTGGGTA TTTTACAAAA ATATCCGTTC TACAGACTGG ATACTGGGGA CTGCCCTTCC TCAAGAAGAA ATTTTGCTGA ATAAAGATAT AGAGCAGGAT CGCTCTATTA TCCAGGTCAT GCTTTTAACT TTTGCCTTTT TATTCTTCCT GTCCCTATTT TTTGTCTCCA TTTACAGGTA TGACGATAGA AGTCTCTGGC TGTTAGCTCT TGTTTTTTCA TCCCTCTGCA TCCTGGGAAT GGGCATCATT TGGCACTTTA CTTTAAATGA ATCGTCGATT GAAGTCGAGA ATGGTAATAT TGTTGTTTTC GACATAGCAG ATGTTGAAAC AGTACTGCTG AATTCCGATA CGAACCCGAA AGCCTTCAGG ATTCCCACGG GGGTCTTTAT CCAGTCCATA GAGTTTTCGA CTTCTAATGA CATCACCATG ACTGGGTATG TCTGGCAAAA TATTTCAGGG CTGAGTGTTG AGAAGGCTTC GCCGAGATTT AGTTTCCCGG AATCAAAAGA AAGCACAGTT GAAAGAGACT ATATGGATGA GGACAAGAAT ATCGTAGGTT GGCGTTTCAC GACTATTCTG CGCCAGCAAT TCGATTATTC CAGATACCCA TTTGACGAGG AAAATATATG GATTAAATTC TGGAACAACA CTTCTGAAGA AAGTGTTCTG GTTCCAGATT TTGATTCCTA TGACAGCCTG TCTCCGGAAA AACTTATCGG CCTAGAAAAC TCTCTCGTGC TTGAAGGCTG GAAGCCACAA AAAACTTTTT TCAGTTACAG GATGAATTCC TATAACACCA ATTTTGGGGT AAAAGATTTT AAACATAGGA ACTTATCCGA GCTTTACTTC AACGTTGCTA TCAAAAGAGA CCTAAAGTCC CCATTTGTTT CCGACTTGCT ACCCATAATA GTAGTAGCCA TCCTTCTATT TGTGGTGCTT TTGATAACGA CCAGGGAAGA AGAGAAAAAT CAGTTCGGGT TTAAATCTTC GGGAGTCTTG ACCTATTGTG CCTCTCTCTT TTTTGTTCTT ATTGTTTCCC ATGCCTCCCT CAGGGCTAAA ATCCCTACGA ATTGTATGAT TTACCTTGAA TATTTCTACC TTATACTGTA TATGGCAATT CTAGGTGTAT CTCTGAATTC AATAGTATTT GCGTCCCATA TGAATATCCC TTTTATTGAT ACAAAGGACA ATCTGTATGT GAAAGTGCTT TACTGGCCTA TAATTACGGG ATTTCTGTTG ATTATTACGC TCCTGAATTT CTATTGA
|
Protein sequence | MTASNSWRKT VVYTALILCL ISFLLIVHAG YEYYSNNTDD KILEKAKGDA YNKASVVLEN ISGELNSTSL LTDGIAKELS SGKLKNDSII RQHILDEMEG NPNIFSIVIA YSPAYYGKLH SLHLKKNGSN ILEFPILYDY TNNNEETTAW YTNAMKKKCG VWNRPYFGVA DGTYLIDYST PFYLAEFKNG SEVAGVVCAS HSIEGIRTQI GSLDLGNTGY GFIFSEEGLI ISYPVQDYLL RNIHKLAKED TELNLIGENI SKNMTDRVVE NDRTGQSSWV FYKNIRSTDW ILGTALPQEE ILLNKDIEQD RSIIQVMLLT FAFLFFLSLF FVSIYRYDDR SLWLLALVFS SLCILGMGII WHFTLNESSI EVENGNIVVF DIADVETVLL NSDTNPKAFR IPTGVFIQSI EFSTSNDITM TGYVWQNISG LSVEKASPRF SFPESKESTV ERDYMDEDKN IVGWRFTTIL RQQFDYSRYP FDEENIWIKF WNNTSEESVL VPDFDSYDSL SPEKLIGLEN SLVLEGWKPQ KTFFSYRMNS YNTNFGVKDF KHRNLSELYF NVAIKRDLKS PFVSDLLPII VVAILLFVVL LITTREEEKN QFGFKSSGVL TYCASLFFVL IVSHASLRAK IPTNCMIYLE YFYLILYMAI LGVSLNSIVF ASHMNIPFID TKDNLYVKVL YWPIITGFLL IITLLNFY
|
| |