Gene Mbar_A1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1203 
Symbol 
ID3624550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1487708 
End bp1488451 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content44% 
IMG OID637700093 
Producthypothetical protein 
Protein accessionYP_304750 
Protein GI73668735 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG ACCAAAGCCC TTTTTCAAAA TATCCAGAGC TCAGCCGATT GATGGAGACC 
GGCGAGCCTG TATGTGTAAC CTTTGAAACA GAGCACGAAA TTGGGCGCAA AGTCGGAAGT
AAAGTAGGGT GCGAAGCTGA AAAAAGTATT GAGGGAAAAA ACGAGGAGAT AATAGCTAGT
ACAGGAGACG AAAAATTTCC TGAAAAATCC CATTTTCTTT TTTGCGAACT TGTGCAGAAA
GCCCGTATGG GAGAAGCGTT CCTTATTTCA GGGCAGAGCT GCTCTCCTGG AGATTATGTG
CTTGGCTTTT CTGAAAAGAG CCCTGCAACA TACTACCTGA ATTCCGGAAG ATATAAAGAC
TCGCAGGCTG CGGAAAATGC AGCCTTATCA CTCCCGAGAT TGAAAAAAAA GTTTTGCTTT
ATAAGAGTCG AGCCCCTGTC CCTGAACACA GGTAGTTTTG ATGTGCTGAT TCTTTTTCTG
AAGCCCGAAA AAGCTATGCG CATTGTTCAG GCAAGTGCCT ACTCGGAAGG AAAAAGGGCA
GTAATGGATA CAATGGGTGC AGCCTCAATC TGCGGAGACT GTACCGTACT TGCATACAGG
GAAAGTATGG GCCTATCTTT CGGGTGCAAG GGATCAAGAA AACATAGTGG ATATGCAGAC
TTTGAAGTTC CTCTTGGGCT TTCTTTTGAA AAAGCATCTG AAATAGAAAG AATTCTCTCA
AAACTTCCGG AAACGAGGGA GTAA
 
Protein sequence
MHTDQSPFSK YPELSRLMET GEPVCVTFET EHEIGRKVGS KVGCEAEKSI EGKNEEIIAS 
TGDEKFPEKS HFLFCELVQK ARMGEAFLIS GQSCSPGDYV LGFSEKSPAT YYLNSGRYKD
SQAAENAALS LPRLKKKFCF IRVEPLSLNT GSFDVLILFL KPEKAMRIVQ ASAYSEGKRA
VMDTMGAASI CGDCTVLAYR ESMGLSFGCK GSRKHSGYAD FEVPLGLSFE KASEIERILS
KLPETRE