Gene Mbar_A1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1179 
Symbol 
ID3624526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1450236 
End bp1451276 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content46% 
IMG OID637700070 
Producthypothetical protein 
Protein accessionYP_304727 
Protein GI73668712 
COG category[R] General function prediction only 
COG ID[COG1244] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01210] conserved hypothetical protein TIGR01210 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAA ATAAAGCAGT AATGGAAATC CGGCAGCGGA TTAAAGTTAG ACCTTCTCCT 
ACCAATGAAC CTGCAGCAAG CTGGACAGGA GTCGACCTGG TAAATGGAAC CCAGGTAAAG
ACGTTAACTG TAATCTTCAA GAGCGCAGGG TGCCGCTGGG GAAAAGCTGG AGGGTGTACT
ATGTGCGGCT ATGTCTATGA CTGCGCAAGT GAACCTCCAA CTCTGGAGGA TTACAAAGCC
CAGCTTGCAA GAGCAATGAA GAAAGCTGAA AAATTCCCTG AGTTTATGGT AAAAATTTTC
ACTTCAGGCA GTTTTCTTGA CGAGCAGGAG GTTCCTTCTG AGGCAAGAGA TGCAATCCTC
AAAATTCTTG CAGATGATCC CAGAGTAGTA AAGGTACTTG CAGAAACCCG CCCTAACTTC
GTAACCGAAG AGAACGTGCA GGAGTGTCTC AAGGTCTTGA AAAATAAGCC CTTTGAGTTG
GCTTTCGGGC TGGAAACAAG CTCGGACAGA ATCCGCAGGG ACTCTATTAA TAAAGGTTTT
ACCTTCAGGG ATTTTGTCCG CGCCTCAGAA ATATCAAGAA TAAATGGGGC AACTGTTAAA
GCCTATCTTA TGCTAAAACC TCTCTTTCTC TCAGAACGCC AGGCCCTTGA GGACATTCTC
CTTTCCATAG ATGATGCGGC TCCTTACGCT GACACAATCT CAATCAACCT CTGTAATGTC
CAGAAAGGCA CTCTTGTCGA AGCGCTCTGG GAAAAAGGGC AATATCGCCC TCCCTGGCTC
TGGAGTATTG TAGAAATCTT GCAAAGGGCA AAAGCCGCTC ACCCAGACCT TCCTATTATG
TCCGATCCTG TAGGCGCAGG CTCAAAACGC GGCCCTCACA ATTGTAAAAT CTGCAGCTCA
GATGTCGCAG ACTCTCTCAG GACTTTTTCA CTTACCCAGA ATCCAGAAGA TCTTAGCAAA
ACAGACTGTG AATGCAAAGA ACTCTGGAGG AAAGTCCTGG AACTTGAAGA CTTTACCTAT
GGAGCACCCA TTTTAGATTA A
 
Protein sequence
MTLNKAVMEI RQRIKVRPSP TNEPAASWTG VDLVNGTQVK TLTVIFKSAG CRWGKAGGCT 
MCGYVYDCAS EPPTLEDYKA QLARAMKKAE KFPEFMVKIF TSGSFLDEQE VPSEARDAIL
KILADDPRVV KVLAETRPNF VTEENVQECL KVLKNKPFEL AFGLETSSDR IRRDSINKGF
TFRDFVRASE ISRINGATVK AYLMLKPLFL SERQALEDIL LSIDDAAPYA DTISINLCNV
QKGTLVEALW EKGQYRPPWL WSIVEILQRA KAAHPDLPIM SDPVGAGSKR GPHNCKICSS
DVADSLRTFS LTQNPEDLSK TDCECKELWR KVLELEDFTY GAPILD