| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1113 |
|---|
| Symbol | |
|---|
| ID | 3627524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1370095 |
|---|
| End bp | 1371102 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637700004 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304661 |
|---|
| Protein GI | 73668646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.79737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAA TCGAAGTTAG AGAATTAGCG CCATCTGAAT ATAATGAATG GGATTTGCTC
GTAGAAAAAG CTCAGCCTGG TACACTCTTT CATACCAGTG AATGGCTTGG AATTTGTAGG
GATGCCCTAT CGAAGGAGCT TAGAATTTAT GGTTGTTTCA GAAAAGGCGA GCTTGTGGGA
GGGTGCCCTC TTTTTGTTAA AAATATCAAA GGAGCTTTGA AAGTAGCGAA TTCTACCTGT
AATATGACCA GCTACAGCGG CCCTCTTATA AAAGAGAGTA ATAGCTCCAA AGCAAGTAAA
CGGGTACAGG AAGTTCACGA CATTCTTAAT CCTCTAAGGG AATTCCTTTG TAAGCAGGGA
TTTGACAGTA TTCACCTTAC GTTCGCTCCA GGTTTTAAAG ATGTAAGGCC TTTTACGTGG
TACGGATGGG ACTCCACTGT GCACTATACC CATTATTTGA ATCTGAACGA AGATGTAGAT
AATAACATTT CAAGAAAGAT TCGAAGAGAA CTTAAAACGG CAAATGAGGC AGGACTTAAA
ACCAGGGTAT GGAACGATCC TGAAACATAT TATCATTTGC TCTCAATGGT CTACGAAAAA
CAGAAATTAG CCCCTCCCCT TCCCAGAGGG TTTTTCGAAA GAGTGTTTAA ACTGATTCAG
GAAAAAGATA TTGGCTATAT GTTTGTCACG GAGACTCCTG AGGGTGAAGC TATTGCAGCT
CACTTAAATC TATATGGAAA GAAGTGCACT GTAACCTGGA CTTCAGCCCT GAACCCGGAT
TTTGGCCGTT TGGGTCCTAA CGCTCTTCTG TATTATAACG AGTTTCTTGA CCTGAAATCC
CGAAATTTCG AGTATATGAA CGTAATGGCA GCAAACATTT CCAGGTTTGC GGATTTCATT
ATGGGCTTTT CTCCTGAGCT AATTCCTTAT TATAGCGTGA CTCTAGAGAG CAAAAAATAT
TCAATCGCAA AAACCATGTA TAAAATTACT CACAAAGAAA CTTACTGA
|
|---|
| Protein sequence | MDEIEVRELA PSEYNEWDLL VEKAQPGTLF HTSEWLGICR DALSKELRIY GCFRKGELVG
GCPLFVKNIK GALKVANSTC NMTSYSGPLI KESNSSKASK RVQEVHDILN PLREFLCKQG
FDSIHLTFAP GFKDVRPFTW YGWDSTVHYT HYLNLNEDVD NNISRKIRRE LKTANEAGLK
TRVWNDPETY YHLLSMVYEK QKLAPPLPRG FFERVFKLIQ EKDIGYMFVT ETPEGEAIAA
HLNLYGKKCT VTWTSALNPD FGRLGPNALL YYNEFLDLKS RNFEYMNVMA ANISRFADFI
MGFSPELIPY YSVTLESKKY SIAKTMYKIT HKETY
|
|---|
| |