Gene Mbar_A1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1101 
Symbol 
ID3627512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1348805 
End bp1349509 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content45% 
IMG OID637699992 
Producthypothetical protein 
Protein accessionYP_304649 
Protein GI73668634 
COG category[S] Function unknown 
COG ID[COG1891] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TTATAAGTCC AATTAATAAA GAGGAAGCAA TAATTGCTTC CAGAGGCGGC 
GCAGACATTG TAGATGTCAA GAATCCCAAA GAAGGTTCCC TTGGTGCAAA TTTCCCATGG
GTAATAAGGG ACGTAAAGGG AGCTGTAAAC GGTAGACAGC CCATAAGCGC AACTATCGGA
GATTTTAACT ATAAACCAGG AACTGCTTCC CTTGCAGCAT TTGGAGCAGC CGTTGCAGGA
GCAGACTATA TTAAAGTTGG CCTTTACGAT ATCCAGACTG AAGATCAGGC CTTAGAGCTT
ATCACAAAAA TAACACAGGC TGTAAAGGAC TATGACTCAA CAAAGAAAGT TGTTGCCTCA
GGATATTCGG ACTACAAGCG CATCAATTCA ATATCTCCAT TACTGCTTCC TTCAATCGCC
GCAAAAGCTG GGGCAGATGT GGTGATGGTT GATACAGGAA TTAAAGATGG AAAATCTACC
TTCGAATTTA TGGACGAGGA AGAACTTAAA AAGTTCACAG GCCTTGCCCA TGAGTGCGGA
CTTGAAAACG CGATTGCAGG CTCCCTGAAA TTTGAGGATC TTCCAGTGCT TGAGAGAATC
GGACCGGATA TTATCGGGGT TCGGGGTATG GTCTGCGGAG GAGATAGAAC AAATTCAATC
CGGCAGGAAC TGGTAGAAAA GCTCGTAGCT GAATGCCAGG CTTGA
 
Protein sequence
MKLLISPINK EEAIIASRGG ADIVDVKNPK EGSLGANFPW VIRDVKGAVN GRQPISATIG 
DFNYKPGTAS LAAFGAAVAG ADYIKVGLYD IQTEDQALEL ITKITQAVKD YDSTKKVVAS
GYSDYKRINS ISPLLLPSIA AKAGADVVMV DTGIKDGKST FEFMDEEELK KFTGLAHECG
LENAIAGSLK FEDLPVLERI GPDIIGVRGM VCGGDRTNSI RQELVEKLVA ECQA