| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1044 |
|---|
| Symbol | |
|---|
| ID | 3624506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1271936 |
|---|
| End bp | 1274095 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699934 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304592 |
|---|
| Protein GI | 73668577 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTA TTTTGGGTAT GAAAACTTCT CAGCCGCTCT CAAGCCTGCG GGAAATCCAT
GGAATCGGTG AACGGGTAGC TGACAGGCTG ATTGAGCATT TCGGCACTGA AGAAGCAGCT
CTTCAGGCTA TTTGCGAGGG CGATATAGCT TCGCTTTCGG AAATCAACGG CATCAGCCAC
AATTTTGCCC TTTCTCTTGC CAGATATGCC AGATCCAGGG CTGAGGGCTG CTCAATTTCT
GATTTTCTCA GGACAAAAGA AGCCCTGGAT ATTTATTCCC GCCTGCTTGA GCTGATAAAA
AGTTTTGCCC ATACGACGCA TGCCAGGGAT AAGCTAAACC TTTTTTACCC ACTACCTGCT
TCACGCATGG ATCTTATCCA GGAAAGGCAG GCTTTCGTAA GAGAATACCT TGAACTGGGA
AATGCCTTCC CCGAGAATTC CGAATTTCTG AAATTGCTTA CGAGAGTCAG TGAACTCAGG
CCTGTTCCCG GAAACTTCAG AGTCAGGGAC CGGATCATTC TGTGCGGAGA CTCAAAAACC
CTTGAAGCAG CCCGAGAAAA GTTCCAGGCC TTTTTGCCTG TCCAGTCTGT AGAAAACCTA
TCGGAATTCG TGGATCTTGC AAGGGGTTAT TCCAATGTTA CTGTTTTTGA TGATACTTAT
CTTGGCTTTG ATCTACCTGA AGACATTGAA CCCGAATATT TCCAGGATCT TTCCAGAGCT
GAATTCTGGC AGGTTTTACC TGAAAAAGAA CTGGCGTTTT TTGCGCGGAA TCTGGACTGC
ATCCGTGCCT GCCTGAGTAT CGTATCATCT CTCCGCTCAG AGAATTTTGA GCTCTTTGAG
GAGTTTTCTA AAGAGAAACT TGATATACTC GAGACTGCTC TCTCAAAACT CGGTGAGGAT
GGAAAGCCTG TTGAAGGTTT TGACCCTGAA ATTGACAGGC TCGGAGCAGC CCTTCAAAAC
CTGGACTCTG CATTGACTTC TGCCCTGCGT GAGGCTAACA AGCGTATGAA CCGAACCCTT
GAAGCAAGTT CGCTTACTCT GAGCGGGCAG GAACTCGTCA GGCTTGTGAG CGGGGGAATG
GAGATTAAGG ACCTGCTTAC AAAGGAACTT AATAGAATCT ATAAAACTGA AACTTCAGTC
GTCAAAGAAG AGCTTGTTGA AAAGCTAGGG CTTCAAAAGC AAGAAAAACT AATGCTCGAC
TCACTCTTTT CCGATGAAAT TTCCTACCCT CTCTGCGCAG ATCAGTCCCA GCTGATGCTT
CTCAGGCAAA AGTTGAACAA TAGCCTTGAG AAAACAAGGC TTGTCCGGAA AAGGGAACTT
GCAAAAACGC TTTCAGTTTT CCACCAACCT GTAGAAAAGC TTGTCAGAAA AGTCCTGGAT
TTTGACCTTG GCTTTTCAAT TGCCTGTTTT TCGACAAAGT TCCAGCTTAA CCTTCCTGAA
CTGATTTCTG AAGCCGGAAT AGGTTTTACA GGCGGAGAAA ACCTATTTTT AAAAGCTCGT
TACGGAAAGA TCGATCCTAT CAGTTATTCC ATTGGAAAAA CCGGCTTTTC TCCAGCAGGT
CTGGAAAACA GGGTTGTACT TTTGAGCGGA GTAAATTCAG GTGGCAAAAC TTCCCTGCTC
GAGCTCTTTG CCCAATGCGT AATTCTTGGG TACATGGGCT TTCCGGTTCC TGCAAAAAAA
CTTGAACTAG GGCCTGTAGA GGAATTCTAC TATTTTGGGA AATCGAAAGG AACTCTCGAT
GCAGGAGCTT TCGAGACTAC TCTCAAGCAA TTTTCAGTGC TTTCCGAAGC CTCAGAAAAA
CTGGTGCTTG CAGACGAACT GGAATCGATC ACTGAGCCTG GAGCTTCTGC ACGAATTATA
GCAGGAATTC TTGAATATCT TTCCAGAAAT GAACAGAGTC TTGGAGTTTT TGTCTCCCAT
CTTTCGGAAC TTATCCTTGA AAATACCGGA GCTAAAGTAA GAGTAGATGG AATTGAGGCC
GATGGTCTGG ACTCCAACCT TGAGTTAATC GTAAACCGGA ATCCTGTATA CAATCTTATT
GCTCGAAGCA CTCCCGAGTT GATTGTGGAA CGGCTGTTCA GAAAGACCAC TGGAAAAGAG
CAGGAGTTTT ACTCACATTT AAAGGATAAA TTTAAAACTG GCTCAAAAGC AAACCTTTAG
|
|---|
| Protein sequence | MKSILGMKTS QPLSSLREIH GIGERVADRL IEHFGTEEAA LQAICEGDIA SLSEINGISH
NFALSLARYA RSRAEGCSIS DFLRTKEALD IYSRLLELIK SFAHTTHARD KLNLFYPLPA
SRMDLIQERQ AFVREYLELG NAFPENSEFL KLLTRVSELR PVPGNFRVRD RIILCGDSKT
LEAAREKFQA FLPVQSVENL SEFVDLARGY SNVTVFDDTY LGFDLPEDIE PEYFQDLSRA
EFWQVLPEKE LAFFARNLDC IRACLSIVSS LRSENFELFE EFSKEKLDIL ETALSKLGED
GKPVEGFDPE IDRLGAALQN LDSALTSALR EANKRMNRTL EASSLTLSGQ ELVRLVSGGM
EIKDLLTKEL NRIYKTETSV VKEELVEKLG LQKQEKLMLD SLFSDEISYP LCADQSQLML
LRQKLNNSLE KTRLVRKREL AKTLSVFHQP VEKLVRKVLD FDLGFSIACF STKFQLNLPE
LISEAGIGFT GGENLFLKAR YGKIDPISYS IGKTGFSPAG LENRVVLLSG VNSGGKTSLL
ELFAQCVILG YMGFPVPAKK LELGPVEEFY YFGKSKGTLD AGAFETTLKQ FSVLSEASEK
LVLADELESI TEPGASARII AGILEYLSRN EQSLGVFVSH LSELILENTG AKVRVDGIEA
DGLDSNLELI VNRNPVYNLI ARSTPELIVE RLFRKTTGKE QEFYSHLKDK FKTGSKANL
|
|---|
| |