| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1035 |
|---|
| Symbol | |
|---|
| ID | 3625036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1260839 |
|---|
| End bp | 1261861 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637699925 |
|---|
| Product | thiamin-monophosphate kinase |
|---|
| Protein accession | YP_304583 |
|---|
| Protein GI | 73668568 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA CAAAAGTATA TTCAGTTGGA GAGCGCGCTC TAATCTCCAT ATTATCTGAG
ATTTTCAAAG CACCTGATGG CAGGGAGAAA GAACAGGAAG GAATCCTTAT AGGCGCAGGT
TCGGATGACT GCGCCGTCCT TGACCTGAAA GGCGAAGACT GCCTGGTTGT TACTACTGAT
ATGCTGCACA GGACTACTGA TTTTCCGGAA GAGATGACAC CCTGGCAAAT AGGCTGGATG
TCAGCAGCCG TAAACCTCAG TGACATTGCA GCCATGGGTG CAGAGCCCAC AGGACTTGTT
ATGGCAATTG GGATGCCTGC AGATACCGAA ATTGCTTTTG TTGAAGCCCT TGCAAAAGGT
ATGCAGGCAT GTACCGAATT CTGCGGAACT ATGATTATAG GGGGCGATCT TGATACCCAC
ACAGAACTGA CAATTACAGG AACGGCACTT GGCAGGGTGA AAAAAAGCCA GCTCCTTCTT
CGGCGCGGAG CAAGACCAGG TGACCTTGTC TGTGTCACGG GCTATACAGG ATCGGCAGGA
GCAGCTCTGG AAGCCCTTCA GTCTGGGAAG CCAGTGAGCG AAACCGTCTT GAAGGCACTT
TTTGAACCTG TCCCGCGCAC GAAAGAAGCC AGGAAGCTAG CCGAATCCGG AGCAGTCACA
TCAATGATGG ATACGAGTGA CGGCCTTGCA ATGTCCCTTT ACGACCTTTC CAGGCAGAGC
CGCGTGGGAT TCATGATCCG GGAAAATGCC CTTCCTGTCC TCAGAGAGGT ACGGAAATTT
GCTTCAAATC CGAACAGGCT AAGGGAATTT TCCCTTTACA CGGGTGGAGA TTTCGAACTT
CTTATTACAA TTGACCCGCA AAAGATCAAA AAAGTACAAA ATATATGTAA CTTAGTCGTT
ATAGGAGAAT GTACAAAGTA TGAAGCAGGC ATTGTACTCG AATCCCCAGA ATGCGAGCAT
ATAACTATAG AGCAGAGAGG ATACCAGCAG CTAAAAGCCG AAACTGTTGA TAGATCCACC
TGA
|
|---|
| Protein sequence | MKNTKVYSVG ERALISILSE IFKAPDGREK EQEGILIGAG SDDCAVLDLK GEDCLVVTTD
MLHRTTDFPE EMTPWQIGWM SAAVNLSDIA AMGAEPTGLV MAIGMPADTE IAFVEALAKG
MQACTEFCGT MIIGGDLDTH TELTITGTAL GRVKKSQLLL RRGARPGDLV CVTGYTGSAG
AALEALQSGK PVSETVLKAL FEPVPRTKEA RKLAESGAVT SMMDTSDGLA MSLYDLSRQS
RVGFMIRENA LPVLREVRKF ASNPNRLREF SLYTGGDFEL LITIDPQKIK KVQNICNLVV
IGECTKYEAG IVLESPECEH ITIEQRGYQQ LKAETVDRST
|
|---|
| |