| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1006 |
|---|
| Symbol | |
|---|
| ID | 3626889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1229273 |
|---|
| End bp | 1230310 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699895 |
|---|
| Product | tRNA-modifying enzyme |
|---|
| Protein accession | YP_304554 |
|---|
| Protein GI | 73668539 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0731] Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAAA TGCCTTTGGA AGAAAAAAAG GAAAATACTG GGGAAAATTT TCCGGAAGCT
CAGAAAAAAA ACAGGAAGGA AGATACTGCT TCGCTTCCTT TTGATATCCC TGATTTTAAA
ACTCTCCTGA AAAAACAGGG TTATGCCATG GCAGGCCGCC ACTCAGCTGT TAAGACCTGT
CTCTGGCTAA GGCATGCTAT GAATGATCAG GGCTTTTGCT ATAAGTCGAA ATTTTATGGA
GTTCAGTCCC ATCGCTGTCT TCAGATGACT CCAACACTTA TGTGCAACCA ACGTTGCCTT
TTCTGCTGGC GTCCGACTGA GGTTCCTGTT CCTGCTCCCG AGGAGTGGGA TTCGCCTGAA
AAGATAGTGG AAGAAAGTAT TGCCTGCCAA CGTAAGTTAA TTACTGGCTT TGGCGGTTCT
CCAAATGCAA TTAAAGAACG CTGGCTTGAG GGTAATGAGC CTAACAACGT TGCAATCTCC
CTGTCCGGGG AGCCGACCTT TTACCCTTAT CTCCCGGAAC TTATCGAGGA GTACAAAAAA
AGAGGTTTTA CGACTTTTCT TGTCACAAAC GGCACAGTTC CTGAGATGCT TGCACAGGTT
TCTCCTTCCC AGCTCTATAT GAGTCTCGAT GCCCCGGATC TTGAGACTTA CCTGAAAGTC
TGCCAGCCCA AATCGCCTGC CCTCTGGGAA AAGATCAATG AATCTTTGTC CCTGATGAAA
CAGAAAAAAT CAAGGACAGT CATCCGAACT ACCCTTGTGA AAGGTGAAAA CCTGTTCAAG
CCTGAGGCTT ATGCCAGGCT AATGGAAAAA GCCTCCCCTG ATTTTGTGGA GATAAAAGCG
TATATGCATC TGGGTTTCTC ACGACTCAGG CTTGACCGCT CTGCAATGCC TACTCATGAG
GAAGTTCTCG AGTTCTCACA GGAACTTGCA AAATATCTTG GATATGAAAT CGCAGATGAA
TCTGAAATCA GCAGGGTAGT CCTGTTATCA AAGGACGGGA GAAAGTCTCC TGTCAATGGG
GAAAAAATCT CCCGTTAA
|
|---|
| Protein sequence | MRKMPLEEKK ENTGENFPEA QKKNRKEDTA SLPFDIPDFK TLLKKQGYAM AGRHSAVKTC
LWLRHAMNDQ GFCYKSKFYG VQSHRCLQMT PTLMCNQRCL FCWRPTEVPV PAPEEWDSPE
KIVEESIACQ RKLITGFGGS PNAIKERWLE GNEPNNVAIS LSGEPTFYPY LPELIEEYKK
RGFTTFLVTN GTVPEMLAQV SPSQLYMSLD APDLETYLKV CQPKSPALWE KINESLSLMK
QKKSRTVIRT TLVKGENLFK PEAYARLMEK ASPDFVEIKA YMHLGFSRLR LDRSAMPTHE
EVLEFSQELA KYLGYEIADE SEISRVVLLS KDGRKSPVNG EKISR
|
|---|
| |