Gene Mbar_A0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0947 
Symbol 
ID3625545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1150971 
End bp1154126 
Gene Length3156 bp 
Protein Length1051 aa 
Translation table11 
GC content35% 
IMG OID637699840 
Producthypothetical protein 
Protein accessionYP_304499 
Protein GI73668484 
COG category[R] General function prediction only 
COG ID[COG1204] Superfamily II helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0339095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGT GGGTAATGAA TTTAATAGAT GATGACTCTT TAAAACAAGC CCATATAGAG 
TCTTCCAGAC GATTACTTCA CGAATCACTA AAATTGGATT ATTCATCAGT CGAAGAAGAG
AACTCAAACT TTTTATTGAT AATTGATTCT TTAGAATTGG CTTTGATTGA TTTATTAGAC
GATGATGAGC AAATCAATAG TCTTCGTAAA ATCAGTGCAG AGCTATTTCA ATTATTAAGA
GTACTTCCCA AGCCAGAGGA TCCTATTGAA GCTGGAAAAG AATATTTGCG CTTATCTTGT
TTTGGCGTTT TAGGAGATCG TGGAGCAGAT GCATCAAGGT TGCTTAGAGA GCTGCCTCCA
ATAGATCTAC CAATTAATTC ACCATATTGG AATAAAAGAA CATTTGCTAC TATTATTGAT
GTGTGGTTGT CTATTATTAG AAAAGATGGA TGGAATGACT TAGATAGAGT TCACGAGAGA
GTTGTAGATT TAAGAAAACA TCAAAATGAA TATGAAAAAG ATTATCTTGA ATCAGAAGGT
GATTATTCAA GAACTGCTGC TTGGGAATTG GTAGCATTAT ATCATTTAGC AAAAGCTGCG
GAATTGTTAG CGATTTATAC AACTCAAGGT CAAGTAGAAG GAAACTACGA TATAAGACAA
CAACTAGAAT CACAATTTGA TTCTGCACTA AACGCATGTA CTAGAGCAGA ACTAGTTGAA
CTAGATAATT TAACTCGATT ATTAGAGTGT ACATCTCAAC AGCTAGTTGA TAATTGTATA
TGGACTATAA CAAGAGCTGT TAATGATCAA GTAACTCAAT TTGTTGAAAC CCTTGTATCA
AGAGAACGAA GTAAACCAAT TTTTGAAATG TTGCCGCCTC AAAGGTATAC TTTACGAGAA
GAAGGATTAC GCAGTTCAAG TCCACGTTCG ATTGTAATTA ATTTGCCTAC ATCTAGTGGA
AAAACGTTTA TTGCTGAATT CCGAATCCTG CAAGCACTTA ATCAATTTGA AAATGGATGG
ATAGCATATC TCGCCCCTAC TCATGCACTC GTAAATCAAA TTTGTACACG TCTAAGAAAA
GATTTTAATC CCCTAAAAAT TAACGTGGAG AAAATCAGCC CTGCTCTTGA AATCGATAGT
CTTGAAGCTG GTCTGCTTAC TGATGTGGAA AAATCTTCTT ATTTCCGAGT GCTGGTTACT
ACACCTGAAA AATTGGATTT AATGCTTCGT GGAGGATGGG AACAAAAAAT AAATCGGCCT
TTATCTTTAG TAATTGTCGA CGAAGCACAT AACCTCTCTC AACCAGTAAG AGGAATAAAA
CTAGAATTGC TGCTTGCTAC TATTAACAGA GAATGTCGTG ATTCCCAGTT TCTGCTATTA
ACTCCTTTTA TTAATAACGC TACACAAATA TCTAAATGGC TTTCTTCCGA TAGTAACAAA
TCGATTGAGA TGAGTGTGGA TTGGAACCCA AATGATAGAG CTATAGCACT AAGTCGCCAT
AAAAAAAGTA ATAACGGTAA CTATTCCTTA TATCTTGAAA CTCTTCACAC AACAAGAAAT
ACACTACATA TCCCTGAAAA ACTACAGTTA AGTAACAATC GTCCACTTGG ATATAATTGG
TCACAAATAA ATAATAACGC TAGTAAACTA GCCGCAGTAA CTGCACAAGT TTTGAAAGAA
AGAGGATCTG TTATAGTCTT GGTGGGAAAA ATTCAACATA CATGGTCACT CGCAAATAGT
TTTAAACACC CTGATAATAA GATTACGGAT TTACCTGAAG ATGTGAAACT TGTAAAACGT
TATATTCAAA GTGAATTTGG TGATGATTTC CCATTATGTG ATTTGCTGGA ATATGGAATT
GGTGTGCATC ACTCTGGTCT GTCGGATGAA ACTAAATGGT TAATGGAATG GTTATTTGAA
TCAGGACATA TTAAAATTCT TGTTGCAACT ACAACGATTG CTCAAGGAGT AAATTTTCCC
GTAACAGCTG TAGTTATGGC TGACTATAGA TATCCATATG GTAAAGAAAT GCAACCAGAA
GAATTTTGGA ATTTAGTTGG CCGAGCAGGG AGAGTAGATC AAGGGAGCGT AGGAATTGTT
GCATTAGCTG CGACGAATGA AAAAAATGCT GTAAAGTTAA AGACGTTTGT TGATAAACAA
GTTTTGTCTC TAAATTCAAC ACTTATAAAA ATGGTAGAAA CAGCTATAAG TGAAGGACAA
ATTTTAGAAT TACAAAAATT GTCCTATCTC CCAGAATGGT CGGCTTTTTT GCAATACATA
GTTCATTCAT ATCGTCAAAT TGGAAATTCT ACTGAATTTA CCAAGCAAAT TGAGTTAATT
TTACGGGGTA CTTTAGGGTT TGAAACATTA AGAAATAATA ATCCTGATAA TGCTAGATAT
CTTATTGCTG GAGTTAGAGC ATATGCTGAT AATTTATCGG GAAATGCTCC ACTTAAGTTG
GTTGATAGTA CTGGTTTTTC GTTAGAAACA ATAAGAAATA CTTTAAAAAG ACTGCGTGAC
GAACGTATTG GAGAAAATAT ATGGGATCCA AATGAATTAT TTAAAGATAA AAAAGATTTG
AGGAAGCTGA TGGGGATATT GTTAGATGTT TCCGAATTAC GTGAAAATTT AGAAGCTGCT
ACTGGTGGTT GGGGGAAAGA TGGAAGTCGT TTAGCAGATA TGGTCACTGA TTGGGTAAAT
GGACTTAGCC TGAAAGAAAT GTCTGACAAA TATTTTGCTA ACGACAAGCA AGGAAATGCT
ATTGATTCCA CAAAAGCTAT GAGTAATTGT TGTAGAAATA TTTTTGGAAA ACTTACACAA
ACCGCCGCAT GGGGCCTCGC TGCTTTACAA ACAATGACTT TTGGAGATAA TTTCGATAAA
TTATCTGAAA CAGACCAAGC AACACTTCGA AATTTGCCTG CAAGAGTTTA TTATGGCGTA
GACACAGATG AAGCAATTGC ACTTCGTTTA TTAGGAGTGC CACGCAGTGC ATCACTTAGC
TTGTCAAAAA ACATGTTTTC AGTAATACAT GAAAAATCTT TGAATGATTT GCGTACAGAA
TTAGCAAGCC ATGATTCGAG ATTATGGACA GAATCAATGG GAAAAATTGG TGAGGATTAT
TATAAGATTT GGAAGGTATT AGAAGGAATT GCCTAA
 
Protein sequence
MKSWVMNLID DDSLKQAHIE SSRRLLHESL KLDYSSVEEE NSNFLLIIDS LELALIDLLD 
DDEQINSLRK ISAELFQLLR VLPKPEDPIE AGKEYLRLSC FGVLGDRGAD ASRLLRELPP
IDLPINSPYW NKRTFATIID VWLSIIRKDG WNDLDRVHER VVDLRKHQNE YEKDYLESEG
DYSRTAAWEL VALYHLAKAA ELLAIYTTQG QVEGNYDIRQ QLESQFDSAL NACTRAELVE
LDNLTRLLEC TSQQLVDNCI WTITRAVNDQ VTQFVETLVS RERSKPIFEM LPPQRYTLRE
EGLRSSSPRS IVINLPTSSG KTFIAEFRIL QALNQFENGW IAYLAPTHAL VNQICTRLRK
DFNPLKINVE KISPALEIDS LEAGLLTDVE KSSYFRVLVT TPEKLDLMLR GGWEQKINRP
LSLVIVDEAH NLSQPVRGIK LELLLATINR ECRDSQFLLL TPFINNATQI SKWLSSDSNK
SIEMSVDWNP NDRAIALSRH KKSNNGNYSL YLETLHTTRN TLHIPEKLQL SNNRPLGYNW
SQINNNASKL AAVTAQVLKE RGSVIVLVGK IQHTWSLANS FKHPDNKITD LPEDVKLVKR
YIQSEFGDDF PLCDLLEYGI GVHHSGLSDE TKWLMEWLFE SGHIKILVAT TTIAQGVNFP
VTAVVMADYR YPYGKEMQPE EFWNLVGRAG RVDQGSVGIV ALAATNEKNA VKLKTFVDKQ
VLSLNSTLIK MVETAISEGQ ILELQKLSYL PEWSAFLQYI VHSYRQIGNS TEFTKQIELI
LRGTLGFETL RNNNPDNARY LIAGVRAYAD NLSGNAPLKL VDSTGFSLET IRNTLKRLRD
ERIGENIWDP NELFKDKKDL RKLMGILLDV SELRENLEAA TGGWGKDGSR LADMVTDWVN
GLSLKEMSDK YFANDKQGNA IDSTKAMSNC CRNIFGKLTQ TAAWGLAALQ TMTFGDNFDK
LSETDQATLR NLPARVYYGV DTDEAIALRL LGVPRSASLS LSKNMFSVIH EKSLNDLRTE
LASHDSRLWT ESMGKIGEDY YKIWKVLEGI A