| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0942 |
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| Symbol | |
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| ID | 3625540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1143794 |
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| End bp | 1145302 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637699835 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_304494 |
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| Protein GI | 73668479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAATA AAAAGGTAAC TGTTTTTGAC ACAACACTGC GTGACGGAGA ACAAACCCCT
GGGGTATCTC TAACTTCTGC CCAGAAGCTG GAAATTGCCC GTCAACTTGA CAAACTCGGG
GTAGACATTA TAGAAGCTGG ATTTCCAATC TCATCAGAAG GAGATAAAGA ATCCGTAAAA
TCTATTTCTA ATGCCGGACT GGATCTTGAG GTTTGTGGAC TTGCCCGTGT ATTGAAAAAA
GACGTTGATG CCTGTTTTGA CAGTGATGTA GGACTTGTGC ATACTTTCGT CCCTACTTCT
GAAGTACAGC GGACATATAC CATCAAAAAA AGCCAGGAAG AAGTAATTCA AATGGCTGTG
GAGACTGTCC AGTACATTAA AGATAATGGG AGAAGATGCA TGTTTTCTGC AATGGACGCT
ACGAGAACCG AACCTGAATA TCTCATAGAG GTTTTCAAAG CAGTGCAGGA AGCAGGATGC
GATATCATTA ACGTGCCAGA CACTGTTGGA GTTATGGTTC CATCAGCAAT GTACAGACAG
ATAAAGGATA TCGCAGATGA AGTAACAATT CCTATTGATG TACATTGCCA TAACGATTTC
GGGCTTGCTG TAGCAAACAG CCTCATGGCA GTCGAAGCAG GTGCGTCCCA GGTTCAGGTT
ACAATAAATG GAATAGGTGA AAGAGCAGGA AACGCCGATC TTTCTCAGAC AGTCATGAGT
CTGACCTCAA TCTACGGGGC AAAAACAAAT ATTCACACTG AGTATCTTGT AGAAACCTCG
AAAATGATTG AAAACTATAC TGGAATCAGG CTACCTCCAA ACACACCTGT AGTAGGCCAA
AACGCATTCT CCCATGAATC CGGAATCCAC AGTCAGGGAG TACTCGAAAA ATCCGATACT
TTCGAGCCCG GAATAATGAC ACCGGAAATG GTAGGACACA AAAGGCGTAT TGTCCTTGGT
AAGCATACAG GTAAACATGC AGTCAAGCAG TCTCTTGAAT CTGCAGGCAT AATCAGCAAT
GACGAGCAGC TTGATGAAAT TGTATCCAGA ATTAAGGAGA TTGCAAATAA AGGAAAGCAC
ATTACAGACG CAGACCTTTA TGCTGTTGCC TCTGCCGTTC TTGGAAAAGC AAGTTCAGAG
GATGAACTGA TTAAACTCAA AGAAGTTTCT GTAATGACAG GAAATATCCT GACACCGACT
GCAGTAGTCA AAGCAGATAT CGAAGGTAAA GAAACCATTG CAGCAAAGAC AGGGGTTGGC
CCTGTAGACG CCGCCCTCAA AGCAGTAAGA GATATCCTGG GAGAAAGTAA CCACTTTAGA
CTCCAGGAAT TCAGGATCGA TGCAATTACA GGTGGAGCAG ATGCCCTTGC AGATGTATAT
ATAGGTCTCG AAAATGAGAA GGGCAGAGTT GTAACTGCAA GGTCTGCAAA CCCGGACATA
GTTATGGCCT CTGTAGAAGC CCTTGTAAAT GCTATGAACC TGCTGTATAA GAGAGAAGAA
AAAAGCTAA
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| Protein sequence | MRNKKVTVFD TTLRDGEQTP GVSLTSAQKL EIARQLDKLG VDIIEAGFPI SSEGDKESVK
SISNAGLDLE VCGLARVLKK DVDACFDSDV GLVHTFVPTS EVQRTYTIKK SQEEVIQMAV
ETVQYIKDNG RRCMFSAMDA TRTEPEYLIE VFKAVQEAGC DIINVPDTVG VMVPSAMYRQ
IKDIADEVTI PIDVHCHNDF GLAVANSLMA VEAGASQVQV TINGIGERAG NADLSQTVMS
LTSIYGAKTN IHTEYLVETS KMIENYTGIR LPPNTPVVGQ NAFSHESGIH SQGVLEKSDT
FEPGIMTPEM VGHKRRIVLG KHTGKHAVKQ SLESAGIISN DEQLDEIVSR IKEIANKGKH
ITDADLYAVA SAVLGKASSE DELIKLKEVS VMTGNILTPT AVVKADIEGK ETIAAKTGVG
PVDAALKAVR DILGESNHFR LQEFRIDAIT GGADALADVY IGLENEKGRV VTARSANPDI
VMASVEALVN AMNLLYKREE KS
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