| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0929 |
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| Symbol | |
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| ID | 3627309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1123131 |
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| End bp | 1124129 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637699818 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_304482 |
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| Protein GI | 73668467 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00370734 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGACA GAATTCAATG GGGGCACGTA TTTTCCAGAG GTCTGGAATA TGCCCTCACT
TTTTTTATAA TCCTTACTGT CAATTTTTTT CTGCCACGGT TTATGCCTGG GGGCCCACTC
CTAAGCATAC TTGGCAGCCA GAATGCAGAC TTGCCGGTTG TCATCGATGA AGAGACAAAA
TACAAGCTTA TGGACTACTA TCACTTGAAC GACCCCCTGC ACTTACAGTT TGTTCATTAT
TTGAGGGATG CAGCACATCT GGATTTTGGT TATTCAATAT TTTACAATGT CCCTGTACTT
GATGTAGTTC TTGGAAGATT GCCCTGGACA CTTCTTCTTA TGGGGACTGC ACTACTACTG
TCTACAATGC TAGGGATTTT TCTTGGGCTG GAATCTTCTT GGAAACGGGG GCAAAGAATC
GACAGCTTAT TGCTCATCAC TTTACCTTTA TTCCGTTCCG TGCCAGTATT CTTTTTGGGG
ACGCTTCTTA TTTTCTTTTT TGGATACAGG ATGGGTTTTT TTCCTGTTTC GGGAGCCGTG
ACACCGTATA TGGATTATCA GGGCAGCTTA TCCGTGGCAA AAGATATCAT TTCTCACCTG
GTACTTCCAC TGACCTGCCT TACAGCTTTT GAGATGCCGG GTACATATTT GCTTGTAAGA
AATGTTTGTT CCCAACAGTT TGAGCGTCCT TACATATTGA TGGATATTGC AAGAGGCCTA
AAAGATAGAC ATGTTAAAAA CCACATTCTT CTCAACTCAA TCGTACCTAT AGTGAATCAA
GTAGCTGCAA TGCTTGGATT CATGGTGGGA GGTGCTGTAT TCGTCGAGAC TATTTTCTCG
TATCCTGGAA TGGGTTTACT TGTTTATAAT TCCTTCATCG AAAGGGATTA TCCTGTTCTT
CAGGGAGCTT TTGTTTTCAT CTCCTTTTTT GTGCTGGCAG GTAACTATGC AGCTGATATC
ATATGTTCCT ATATTGATGG TCGAAGTGGG CAGGAGTGA
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| Protein sequence | MLDRIQWGHV FSRGLEYALT FFIILTVNFF LPRFMPGGPL LSILGSQNAD LPVVIDEETK
YKLMDYYHLN DPLHLQFVHY LRDAAHLDFG YSIFYNVPVL DVVLGRLPWT LLLMGTALLL
STMLGIFLGL ESSWKRGQRI DSLLLITLPL FRSVPVFFLG TLLIFFFGYR MGFFPVSGAV
TPYMDYQGSL SVAKDIISHL VLPLTCLTAF EMPGTYLLVR NVCSQQFERP YILMDIARGL
KDRHVKNHIL LNSIVPIVNQ VAAMLGFMVG GAVFVETIFS YPGMGLLVYN SFIERDYPVL
QGAFVFISFF VLAGNYAADI ICSYIDGRSG QE
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