| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0899 |
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| Symbol | |
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| ID | 3625944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1083806 |
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| End bp | 1087246 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637699786 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_304453 |
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| Protein GI | 73668438 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAAA CGATTGCAAG TAAGGAAATG CACGAATATT TTGACGAACT CGAAGCAAGA
CTCAAAAAGG CTATCGAGAT TGCAAATACA GCTCGAGCTC GTGGAGGTGA CCCAAAGCCC
GTTGTAGAAA TTCCCCTTGC TAAAGATCTT GCGGATAGGG TGGAGAACCT TATAGGAGTA
GAAGGAGTAG CCGCAAAGAT CCGAGTGCTT GAAGAAAAAA TGTCTAGAGA AGAATGTGCT
CTCGAAATCG GGCGTCAGGT CGCAGAAGGA GAAGTGGGGA ACTTCGCAAC AAAAAAAGAT
GCAGTTGAAG CTGCGATCCG GGTTTCCATG GCCGTCATTA CAGAAGGAGT GGTTGCAGCC
CCGATTGAAG GGATTAATAA AGTCGAACTG GGAAAGAACG ACGATGGTTC CGAGTATATC
CGGATTTTTT ATTCCGGGCC TATCCGGAGT GCAGGTGGAA CAGCCCAGGC TCTTTCCGTG
CTCGTTGGTG ATTACGTAAG GCGTGGGATA GGGATTGACC GCTATAAGCC AAGACCTGAG
GAAGTAGAGC GTTATGTAGA AGAGATCGTT CTTTATAAGA GGGTCGCAAG CTTGCAGTAT
ATGCCTTCGG AAGACGAGAT CCGTCTGATA GTCAAGAATT GCCCTGTCTG TATTGACGGA
GACCCAACCG AGGAAGCTGA GGTTGAAGGT CACAGAAATC TCGAAAGAAT AGGGACAAAC
CGCATAAGAG GGGGAATGTG CCTTGTGCTT GCTGAGGGGC TCGCCCTTAA AGCCCCCAAA
GTCAAGAAGC ATGTTAATAA GTTGAATATG GACGGATGGG ACTGGCTGGA TATCCTCATA
GGGGGTGCAA AAACCGGAGG CGATGAAGAA GATGAGAAGA AAAACAAGAT TAAGCCGAAG
GATAAGTACA TAAGAGACCT GATTGCAGGC AGGCCGGTTT TTTCCCATCC TTCAAGGCCA
GGAGGGTTCA GGCTCCGCTA CGGGCGGTCC AGAAATACTT CTTTTGCGGC TGCCGGGATC
AATCCGTCTA CTATGGTTCT GCTTGATGAT TTTATTACTA ACGGGACTCA GCTCAAGGTT
GAAAGGCCTG GAAAGGCTGC AGCTATGTCT GCCGTAGACT CAATTGAAGG ACCAACTGTG
CGCCTTTATT CCGGAGACCT TGTTCGTATA GATGATATAA AGGAAGCTTA TGAGCTTCGC
TCGCAGGTCG AGGTAATAGT AGATATTGGA GAGATCCTGA TTAATTATGG GGATTTCCTG
GAAAACAACC ATCCTCTCAT GCCTTCACCT TACGTTTTTG AATGGTGGCG TTACGACTAT
GAAGCAGCTT GTTCTGAGAT AATACCTGAA GACGAGTTGA AAGATCCTTC GTCAGCTCTG
GCTCTCAGGC TTGCGGAGGA ATACGATGTC CCTCTACATC CGAAGTTTAC GTATTTATGG
CATGACATAA ATCGAACTGA ATTTGAGGCT TTAAGGAAAT TCGTAGTCGG GAGGGGAAAT
TTCTCGGTTG AAGACGAAAT TCTCAGGTTA CCCCTGAAAG CCTGTATAGA AAATGGTGTC
AAACTCATAC TTGAAAAACT CCTTGTACTT CACAGGGTAA AAGCTGACAC AATCCTGATT
AAAGAAGCTC TTCCTTTTAT TCTCTGCCTC GGGCTTGACT GCCATCTGAA AGAGAAAGCA
CCTATGCCTG ATACCGATAA CATGGTAAAT GCTACGGCTT TTTTAAGTGG ATTTAAAGTT
CTTCCGAGGG CTCCTTCGAG AATAGGGGCA AGAATGGGAA GACCGGAAAA AGCCAACCTG
AGAAAGATGT CTCCTGCAGC TCAGGTTCTT TTTCCTATAG GTAATGCTGG AGGACTTACA
CGGAATCTTG TATCTGCTTC AAATTATTCG GTCTCCATGA ATGGAAAAAT AGGCGAAATT
GAAGTGGAGA TGGGTATCAG GGAATGTCCT GCCTGTGGGA AAGAGACTTA TTTCTGGCGC
TGTGATTGCG GAGAGTATAC CCGTCCCAAA CTCTTCTGTC CTCGCTGTAA AATTGAGGTT
CGAAACTCTG AAACCTGCCC TAAATGCGGC AGAAAGCCAA CTTCTGTTTC AAATGTCAAA
CTGGATTTCC GTTCTATATA CAAGCGGGCT TTTGAGAATG TAGGGGAAAG AGAGAAAATG
GACCTCATTA AAGGTGTAAA ACGGCTCATG AATGGGCAGA TGACTCCCGA ACCCCTGGAA
AAGGGGATCT TGAGGGCAAA ACATGATGTC TATATTTTTA AGGACGGGAC TGTTCGCTAT
GATATGTCAG ATATTCCTCT TACACATGTC AGGGCTGATG AAATCGGAAT AACAGCAGCT
AAACTCAGGG AACTCGGTTA TGTGGAAGAC ATTTACGGAA ATCCCCTCGA AAGAGATGAT
CAAATAGTCT GCCTGAAGGT TCAGGATCTT GTGATTTCTT ATGATGGGGG CGGGTATATG
CTGCGTACTG CACAATATGT GGATGACCTG CTTGTGAAAT ATTATGGAGT TGAACCCTAT
TACAATGCCA AAACAATTCA GGATCTTGTA GGCGTACTGC TCATAGGGCT TGCTCCACAT
ACCTCCGCAG GCGTACTGGG GCGTTTAATA GGATTTACGA GAGCTTCAGT CGGCTATGCT
CATCCTTTCT TTCACGCTTC AAAACGCAGG AACTGCGATG GAGACGAAGA TTGTGTAATG
CTACTCATGG ATGGAATCCT TAATTTCTCA AGGGCTTATC TCCCGGAGAA AAGGGGTGGA
AAAATGGATG CTCCTCTTGT ACTTACTACA AGAATAGATC CCAAAGAAGT GGACAAGGAA
GCACATAATA TAGATTTGCC TGCAAGATAT CCTCTGGAGT TTTACAGGGC TACTCAGGAG
ATCAAAAATC CTACAGAGCT TGAAGGTATT ATGGATCTGG TGAGTAGTCG ACTTGGAACT
CCGGAACAAT ACGAGCATTT TATGTTCACA CATGATACTT CTGATATTGC TGCAGGTCCA
CTTAATTCTT CATATAAGAC TCTTGGAAGT ATGATAGATA AAATGGAGGC TCAACTTTCT
CTTGCTAACA AAATAAGGGC AGTAGATGCT CCGGATGTAG CTGAAAGAGT CCTCAAGTCT
CATTTCCTTC CTGATCTTCT TGGAAATCTT CGTTCCTTTT CCAGGCAGCG GATGCGCTGT
ATAAAATGTG GGGCGAAGTT CAGGCGCCCT CCATTAACTG GGGCCTGTCC TAAGTGTGGC
GGTAATGTAG TACTGACCGT ACACGAAGGA GCTGTCCGTA AATATCTTGA GATATCAAAA
GAAATTGGGA AAAGGTATGG AGTTTCTAGT TATACCCAAC AGAGAATTGA ACTTCTGGAT
AAAGATATAT GTTCTCTATT CGAGAATCAC AGAGTTAAAC AGCTGGGAAT TTCAGATTTC
ATGTCTGGAT CTGCGCGCTG A
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| Protein sequence | MGETIASKEM HEYFDELEAR LKKAIEIANT ARARGGDPKP VVEIPLAKDL ADRVENLIGV
EGVAAKIRVL EEKMSREECA LEIGRQVAEG EVGNFATKKD AVEAAIRVSM AVITEGVVAA
PIEGINKVEL GKNDDGSEYI RIFYSGPIRS AGGTAQALSV LVGDYVRRGI GIDRYKPRPE
EVERYVEEIV LYKRVASLQY MPSEDEIRLI VKNCPVCIDG DPTEEAEVEG HRNLERIGTN
RIRGGMCLVL AEGLALKAPK VKKHVNKLNM DGWDWLDILI GGAKTGGDEE DEKKNKIKPK
DKYIRDLIAG RPVFSHPSRP GGFRLRYGRS RNTSFAAAGI NPSTMVLLDD FITNGTQLKV
ERPGKAAAMS AVDSIEGPTV RLYSGDLVRI DDIKEAYELR SQVEVIVDIG EILINYGDFL
ENNHPLMPSP YVFEWWRYDY EAACSEIIPE DELKDPSSAL ALRLAEEYDV PLHPKFTYLW
HDINRTEFEA LRKFVVGRGN FSVEDEILRL PLKACIENGV KLILEKLLVL HRVKADTILI
KEALPFILCL GLDCHLKEKA PMPDTDNMVN ATAFLSGFKV LPRAPSRIGA RMGRPEKANL
RKMSPAAQVL FPIGNAGGLT RNLVSASNYS VSMNGKIGEI EVEMGIRECP ACGKETYFWR
CDCGEYTRPK LFCPRCKIEV RNSETCPKCG RKPTSVSNVK LDFRSIYKRA FENVGEREKM
DLIKGVKRLM NGQMTPEPLE KGILRAKHDV YIFKDGTVRY DMSDIPLTHV RADEIGITAA
KLRELGYVED IYGNPLERDD QIVCLKVQDL VISYDGGGYM LRTAQYVDDL LVKYYGVEPY
YNAKTIQDLV GVLLIGLAPH TSAGVLGRLI GFTRASVGYA HPFFHASKRR NCDGDEDCVM
LLMDGILNFS RAYLPEKRGG KMDAPLVLTT RIDPKEVDKE AHNIDLPARY PLEFYRATQE
IKNPTELEGI MDLVSSRLGT PEQYEHFMFT HDTSDIAAGP LNSSYKTLGS MIDKMEAQLS
LANKIRAVDA PDVAERVLKS HFLPDLLGNL RSFSRQRMRC IKCGAKFRRP PLTGACPKCG
GNVVLTVHEG AVRKYLEISK EIGKRYGVSS YTQQRIELLD KDICSLFENH RVKQLGISDF
MSGSAR
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