| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0785 |
|---|
| Symbol | |
|---|
| ID | 3625393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 946700 |
|---|
| End bp | 947602 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637699676 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304342 |
|---|
| Protein GI | 73668327 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000784162 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA TACTCCAAAG GGAGTTTATA TATCTGTGGT ACTACTTCAA CATCCAATTC
AACCAAATTG CAAAATATTG GGCATTTGGT ATTTTCCTGG GATCGGTAAT TTCCGTATTT
GGTAAAGATA GGATCCATAG GTTGTTTGTT TCAATTCAAA ACAAACGTCT GGGAATATTT
GGAGTGGTTC CGGCAAGCCT GTTCGGAATC ACCTCCCCTC TTTGTATGTA CGGAACAATA
CCTATCGCTG CTTCATTCTC CGAAAAAGGC ATGAGAGATG ACTGGCTGGC TGCTTTTATG
ATGAGCTCTA TTTTGCTGAG TCCTCAACTG CTCATTTACA GCGCCGCTCT CGGCAGGACA
GCGTTTGTCA TACGTTTTGT TTCATGTTTA ACTTGTGGTA TCCTGGCAGG GCTTTGTGTC
AGGCTCTTTT TCAGGAATAG GAACTTTTTT AATTTTTCCG AATTTGCAGA ACCGGCAAAT
CGGGATACAG ATCCCAATAT ACTGCTCCGC CTGCTAAAAA ACATCTGGAG GAACATCAAG
GCAACAGGAG GTTATTTTCT TATTGGTATC GCCCTCTCGG CAATGTTTCA GCATTATGTG
CCTTCCGATT CGTTTGCCGC TCTTTTCGGC AGTCAGCGAG GATTTGGCGT GTTGATGGCA
GCAACGATAG GGGTCCCTCT ATATGTGTGT GGTGGGGGTA CGATTCCCTT GCTGGTGGAA
TGGCTGCATT CCGGCATGAG CATGGGATCT GCTGCTGCGT TTATGGTCAC CGGGCCCGCA
ACAAAAATTA CGAACCTTGG GGCTGTCAAA ATTGTTCTTG GTGCCAGGCA ATTCAGTATC
TACCTGTTAT TTACAATTCT ATTTGCAATT ACAACAGGGG TTATCATAGA CTGTTTTTTG
TAA
|
|---|
| Protein sequence | MSDILQREFI YLWYYFNIQF NQIAKYWAFG IFLGSVISVF GKDRIHRLFV SIQNKRLGIF
GVVPASLFGI TSPLCMYGTI PIAASFSEKG MRDDWLAAFM MSSILLSPQL LIYSAALGRT
AFVIRFVSCL TCGILAGLCV RLFFRNRNFF NFSEFAEPAN RDTDPNILLR LLKNIWRNIK
ATGGYFLIGI ALSAMFQHYV PSDSFAALFG SQRGFGVLMA ATIGVPLYVC GGGTIPLLVE
WLHSGMSMGS AAAFMVTGPA TKITNLGAVK IVLGARQFSI YLLFTILFAI TTGVIIDCFL
|
|---|
| |