Gene Mbar_A0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0592 
Symbol 
ID3627998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp710503 
End bp714030 
Gene Length3528 bp 
Protein Length1175 aa 
Translation table11 
GC content45% 
IMG OID637699485 
Productcondensin subunit Smc 
Protein accessionYP_304152 
Protein GI73668137 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATATAA AAGAGATTGA ATTTGTTAAT TTTAAGTCTT TCGGAAAAAA AGTAAAGATT 
CCCTTTTATA ATGACTTTAC TACAATTTCA GGTCCAAACG GGAGTGGGAA GTCTAACATA
ATAGATGGGA TTCTTTTTGC ACTCGGGCTC ACAAGTTCAA GGACCCTTCG CGCTGAAAAA
CTTACCGATT TGATTTACAA CGGCGATGCG TCAAAAAAGC CTGATTTTGC TCAGGTTACT
ATCCGTTTTG ACAACTCGGA CCATAAGTTA CCTCTAGAGC TTGACGAGAT TGAAGTCTCA
AGAAAGGTTC GGCGGACAAA AAACGGGTAT TACAGCTATT TTTATTTCAA TGGAAAATCC
GTAAGCCTTG GAGAAGTCCA TTCTCAGCTT GAAAAAGCCG GGATAACGCC TGAAGGCTAT
AATGTGGTTA TGCAAGGAGA TGTAACGCAG ATAATCTCCA TGACCTCTGT AGAAAGAAGA
AAGATTATAG ACGAAATTGC AGGGGTTGCA GAATTTGACG AACGCAAGCA AAAGGCGCTT
GGGGAACTGG AAGTCGTAAA ACAGCAAATC GAGCGCGTGG ATATAATCCT TGAAGAGGTA
CGCACCCAGC TAGGAAAACT GGCCGGAGAA CGTGACCAGG CTTTAAAATA CCAGGCTCTC
AAGACTGAAA AAGTAAAATT TGAAGGATAT CTCCTACTTT CCAAACTCAA GGACGCAAGG
GCTGAACTGC AGAATGTGGA GAAGGAAATC ACAGGCAAAG AAGAGCATCT TGAAAAAGTC
CAGATTGTCC TCAACGAGAG AACAAAGGAA CTTCAGGCGC TTGAAGAAAC CCTGGAAAAA
CTTTCGGTTG AAATCCGAAA AAAAGGAGAG GATGAACAGC TTCAGGTAAA GAGGGAGATC
GAAGAGACAA AGGGAGAAAT TTCTCGCTGC GTAGATAGTA TCGAGCTTTC GGAATCCGAA
CTTGAGGAAG CTGATTCGAG GCGCAGGAAA GCCTTTGTAG AGATCGATTC CACCAAGGGC
AATGTTGAGG AACTCAAAGA AAAAATTGAA GCCGAAAACC TGAGAAAAGA AAGCATTTCT
TCAGAACTTT CCGAGCGCAA AACCGAACGC ATGCTGCTTC AGAGCAGAAT TGCAGATGTG
GACGCAAAAT TTGCTGCTAC GCGGGATGAG CTCATGGCTG CCAGGAAGAA GCTTGAGGAT
GCAAAAAACG AGAAAAATGA ATTAATCCGA ACCGAAGATC GGCTCCTTGA TACCCTCCGG
AGAAAATCTT TAGAACTCCG AGAGATAGAA AACCAGATCA AAGATGCTGA AGCCGCGGTT
GCTACTTCTG ATAGTGATAC GCTTTCTGTC AGGTACGAGC TTGAAAAGCT TTCTGAAAAC
CTGGAATCTC TTATCCGGGA CCGTGATGAT ATTGAAAGCA GCCATTTCAG GATAAAGGAA
GATATAAAGA AACTTGAGAA CAGGCTTCAC GGCCTCCAGC AGGAGTATAC AATTACGGAG
ACAAGAGTGC GGGCATCGGA ACAGGGCAGA GGCTATTCCA GAGCTGTGGA GATGATAATA
GGGGCTGCAA GGCAGGAAGA CCTTTTCGGA ATTAATGGGA CCATTGCCCA GCTTGGAAGA
GTGGAAAGGC AATACTCAAC AGCTCTGGAG GTTGCTGCGG GAAACCGAAT GCAAGCGATT
GTTGTGGATA CGGACGCCGA TGCTGCCGAA GCAATCGAAT ACCTGAAGCG GAGAAAAGGA
GGGCGAGCAA CCTTTCTTCC TCTCAACAAA CTGAGAGAGC CCAGGCGGCT TGAAAATCTA
AGTTACGAAA ACGGAGTAAT AGGATACGCA ATTGACCTTA TTCAGTTTGA TTCCGGTTTT
GAGCCCGCTT TCTGGTATGT TTTTCAGGAT ACTCTTGTCA TGGAAAACCT TGAAAGTGCT
CGCCGCCTCA TGGGAAAAGC AAGAATGGTA ACCCTTGAAG GTGAACTTCT TGAAAAGAGT
GGAGCAATGG TAGGAGGGTC AATATCCTCT AAATCGGGCA CTTCTTTTGC AGCCGCAGAA
AAAGATAAAC TGCTTGAGCT TGCAGAGAAG ATCAGGTCCC TGGATGAAAG CCGGAATGCG
GCAATAAACA AGCAGGACAG CATTGAAAGC CATCTTTTCG AACTGAGCAG AAAAATTCGG
GACTGTGAGG CTACGATCTC ACGAAAAGAG AGCCAGCTTG ATGAAATTGC AGGCAGGGAA
GCAAAACTTG CTGAACTTCT TGAAGCAAAA CAGGCCGACC TTAAAGCAAT TGAGGAGTCC
AGAACCGAAC TCGGAACTGA AATGGATAGG GTAACTGCGG AAAAAGCTGA CAAAGAGAAG
GTTGTATCCG AACTTGAGGA GCAGATCTCA GGACTTGAAG CAAAACTTGC GGATTCTCCC
CTGCCTGAAA TCAATAAAAA GATAGAATTC GTCGATGAGG AACTCCGCAG GCTGGATGGC
CGAATCCGGG ATACTGAAGC CACATTGAAT GCCCTGAAGC TTGAAAAAGA GTATGCTGAA
CAGAAAATTG CCGAAGCAAA GGAACTTATC AGGGAAATTG ATGAGAAGAA AGCTTCAAGA
ATGGAAAAAG TTAACTCTCT GAAGATAAAA ATAAAGGAAT GTGAGGAAAA ACTTGAGGAA
AAAAAAGCCA GGGAAATTGA GCTTTCGAAT GAACTGATAG GGCTCCAGCA AGAACGGGAA
AAGGTTCAGG CTGAACACAA TGCGGTCAAA CGCAGAGTAA GTATTTCCTC AACTACGCTT
GAAAAGGCAA AGCAGCAGGT GCTTACGCTG AAAGCTACGA AAAATGCGCT TTTAGATCAG
GAAAAGCAAT TTGTCGAAGA AATACTCAAA AGAGGCATAG AGGAGACTGA TGAGGTTCCG
AATTACGAAA CCGTTTACAT GCGGATTCAG GCAATCGATG AAGCCCTACG AAGGCTCGAA
CCCGTAAACA TGAGAGCAAT TGACGAGTAT AATGAGGTAG AGTTAAGACT TTCGGATTTG
CAAGGAAAAC GTGACACTCT CTTTACCGAG AGAGAGCAGC TCCTTGAGCG CATCGACCAG
TATGAGCATT TAAAACGAGA TGCCTTTATG GAGGCCTATA CAAGCATTAA TGCCAACTTC
AAGGAGATTT TCCATGAGCT TTCCGACGGG ATGGGTGAAC TCTTGCTTGA TAACCCTGAT
GACCCTTTTG CAGGAGGGAT GACACTTAGG GCACAGCCCA AGGAAAAAAC TCTCCAGCGG
ATCGAGGCAA TGTCCGGAGG AGAAAAAAGC CTTACTGCAC TTGCGTTCAT ATTCGCAATC
CAGCAATACC GTCCTGCTCC CTTTTATGCC TTTGACGAAA TTGATATGTT TCTTGACGGC
TGGAATGTGG AAAGAGTTTC AAGGCGCGTA AAAACCTCAG GATCAAAAGT CCAGTTTATT
GTTGTTTCCT TAAGAAAACC TATGATCCAG GCTGCATCCA GGACAATAGG AGTTACAATG
CAGGAAAATA ACCTCACGAG CATTACCGGG GTGAAACTTA ATGGCTGA
 
Protein sequence
MYIKEIEFVN FKSFGKKVKI PFYNDFTTIS GPNGSGKSNI IDGILFALGL TSSRTLRAEK 
LTDLIYNGDA SKKPDFAQVT IRFDNSDHKL PLELDEIEVS RKVRRTKNGY YSYFYFNGKS
VSLGEVHSQL EKAGITPEGY NVVMQGDVTQ IISMTSVERR KIIDEIAGVA EFDERKQKAL
GELEVVKQQI ERVDIILEEV RTQLGKLAGE RDQALKYQAL KTEKVKFEGY LLLSKLKDAR
AELQNVEKEI TGKEEHLEKV QIVLNERTKE LQALEETLEK LSVEIRKKGE DEQLQVKREI
EETKGEISRC VDSIELSESE LEEADSRRRK AFVEIDSTKG NVEELKEKIE AENLRKESIS
SELSERKTER MLLQSRIADV DAKFAATRDE LMAARKKLED AKNEKNELIR TEDRLLDTLR
RKSLELREIE NQIKDAEAAV ATSDSDTLSV RYELEKLSEN LESLIRDRDD IESSHFRIKE
DIKKLENRLH GLQQEYTITE TRVRASEQGR GYSRAVEMII GAARQEDLFG INGTIAQLGR
VERQYSTALE VAAGNRMQAI VVDTDADAAE AIEYLKRRKG GRATFLPLNK LREPRRLENL
SYENGVIGYA IDLIQFDSGF EPAFWYVFQD TLVMENLESA RRLMGKARMV TLEGELLEKS
GAMVGGSISS KSGTSFAAAE KDKLLELAEK IRSLDESRNA AINKQDSIES HLFELSRKIR
DCEATISRKE SQLDEIAGRE AKLAELLEAK QADLKAIEES RTELGTEMDR VTAEKADKEK
VVSELEEQIS GLEAKLADSP LPEINKKIEF VDEELRRLDG RIRDTEATLN ALKLEKEYAE
QKIAEAKELI REIDEKKASR MEKVNSLKIK IKECEEKLEE KKAREIELSN ELIGLQQERE
KVQAEHNAVK RRVSISSTTL EKAKQQVLTL KATKNALLDQ EKQFVEEILK RGIEETDEVP
NYETVYMRIQ AIDEALRRLE PVNMRAIDEY NEVELRLSDL QGKRDTLFTE REQLLERIDQ
YEHLKRDAFM EAYTSINANF KEIFHELSDG MGELLLDNPD DPFAGGMTLR AQPKEKTLQR
IEAMSGGEKS LTALAFIFAI QQYRPAPFYA FDEIDMFLDG WNVERVSRRV KTSGSKVQFI
VVSLRKPMIQ AASRTIGVTM QENNLTSITG VKLNG