Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0592 |
Symbol | |
ID | 3627998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 710503 |
End bp | 714030 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637699485 |
Product | condensin subunit Smc |
Protein accession | YP_304152 |
Protein GI | 73668137 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATATAA AAGAGATTGA ATTTGTTAAT TTTAAGTCTT TCGGAAAAAA AGTAAAGATT CCCTTTTATA ATGACTTTAC TACAATTTCA GGTCCAAACG GGAGTGGGAA GTCTAACATA ATAGATGGGA TTCTTTTTGC ACTCGGGCTC ACAAGTTCAA GGACCCTTCG CGCTGAAAAA CTTACCGATT TGATTTACAA CGGCGATGCG TCAAAAAAGC CTGATTTTGC TCAGGTTACT ATCCGTTTTG ACAACTCGGA CCATAAGTTA CCTCTAGAGC TTGACGAGAT TGAAGTCTCA AGAAAGGTTC GGCGGACAAA AAACGGGTAT TACAGCTATT TTTATTTCAA TGGAAAATCC GTAAGCCTTG GAGAAGTCCA TTCTCAGCTT GAAAAAGCCG GGATAACGCC TGAAGGCTAT AATGTGGTTA TGCAAGGAGA TGTAACGCAG ATAATCTCCA TGACCTCTGT AGAAAGAAGA AAGATTATAG ACGAAATTGC AGGGGTTGCA GAATTTGACG AACGCAAGCA AAAGGCGCTT GGGGAACTGG AAGTCGTAAA ACAGCAAATC GAGCGCGTGG ATATAATCCT TGAAGAGGTA CGCACCCAGC TAGGAAAACT GGCCGGAGAA CGTGACCAGG CTTTAAAATA CCAGGCTCTC AAGACTGAAA AAGTAAAATT TGAAGGATAT CTCCTACTTT CCAAACTCAA GGACGCAAGG GCTGAACTGC AGAATGTGGA GAAGGAAATC ACAGGCAAAG AAGAGCATCT TGAAAAAGTC CAGATTGTCC TCAACGAGAG AACAAAGGAA CTTCAGGCGC TTGAAGAAAC CCTGGAAAAA CTTTCGGTTG AAATCCGAAA AAAAGGAGAG GATGAACAGC TTCAGGTAAA GAGGGAGATC GAAGAGACAA AGGGAGAAAT TTCTCGCTGC GTAGATAGTA TCGAGCTTTC GGAATCCGAA CTTGAGGAAG CTGATTCGAG GCGCAGGAAA GCCTTTGTAG AGATCGATTC CACCAAGGGC AATGTTGAGG AACTCAAAGA AAAAATTGAA GCCGAAAACC TGAGAAAAGA AAGCATTTCT TCAGAACTTT CCGAGCGCAA AACCGAACGC ATGCTGCTTC AGAGCAGAAT TGCAGATGTG GACGCAAAAT TTGCTGCTAC GCGGGATGAG CTCATGGCTG CCAGGAAGAA GCTTGAGGAT GCAAAAAACG AGAAAAATGA ATTAATCCGA ACCGAAGATC GGCTCCTTGA TACCCTCCGG AGAAAATCTT TAGAACTCCG AGAGATAGAA AACCAGATCA AAGATGCTGA AGCCGCGGTT GCTACTTCTG ATAGTGATAC GCTTTCTGTC AGGTACGAGC TTGAAAAGCT TTCTGAAAAC CTGGAATCTC TTATCCGGGA CCGTGATGAT ATTGAAAGCA GCCATTTCAG GATAAAGGAA GATATAAAGA AACTTGAGAA CAGGCTTCAC GGCCTCCAGC AGGAGTATAC AATTACGGAG ACAAGAGTGC GGGCATCGGA ACAGGGCAGA GGCTATTCCA GAGCTGTGGA GATGATAATA GGGGCTGCAA GGCAGGAAGA CCTTTTCGGA ATTAATGGGA CCATTGCCCA GCTTGGAAGA GTGGAAAGGC AATACTCAAC AGCTCTGGAG GTTGCTGCGG GAAACCGAAT GCAAGCGATT GTTGTGGATA CGGACGCCGA TGCTGCCGAA GCAATCGAAT ACCTGAAGCG GAGAAAAGGA GGGCGAGCAA CCTTTCTTCC TCTCAACAAA CTGAGAGAGC CCAGGCGGCT TGAAAATCTA AGTTACGAAA ACGGAGTAAT AGGATACGCA ATTGACCTTA TTCAGTTTGA TTCCGGTTTT GAGCCCGCTT TCTGGTATGT TTTTCAGGAT ACTCTTGTCA TGGAAAACCT TGAAAGTGCT CGCCGCCTCA TGGGAAAAGC AAGAATGGTA ACCCTTGAAG GTGAACTTCT TGAAAAGAGT GGAGCAATGG TAGGAGGGTC AATATCCTCT AAATCGGGCA CTTCTTTTGC AGCCGCAGAA AAAGATAAAC TGCTTGAGCT TGCAGAGAAG ATCAGGTCCC TGGATGAAAG CCGGAATGCG GCAATAAACA AGCAGGACAG CATTGAAAGC CATCTTTTCG AACTGAGCAG AAAAATTCGG GACTGTGAGG CTACGATCTC ACGAAAAGAG AGCCAGCTTG ATGAAATTGC AGGCAGGGAA GCAAAACTTG CTGAACTTCT TGAAGCAAAA CAGGCCGACC TTAAAGCAAT TGAGGAGTCC AGAACCGAAC TCGGAACTGA AATGGATAGG GTAACTGCGG AAAAAGCTGA CAAAGAGAAG GTTGTATCCG AACTTGAGGA GCAGATCTCA GGACTTGAAG CAAAACTTGC GGATTCTCCC CTGCCTGAAA TCAATAAAAA GATAGAATTC GTCGATGAGG AACTCCGCAG GCTGGATGGC CGAATCCGGG ATACTGAAGC CACATTGAAT GCCCTGAAGC TTGAAAAAGA GTATGCTGAA CAGAAAATTG CCGAAGCAAA GGAACTTATC AGGGAAATTG ATGAGAAGAA AGCTTCAAGA ATGGAAAAAG TTAACTCTCT GAAGATAAAA ATAAAGGAAT GTGAGGAAAA ACTTGAGGAA AAAAAAGCCA GGGAAATTGA GCTTTCGAAT GAACTGATAG GGCTCCAGCA AGAACGGGAA AAGGTTCAGG CTGAACACAA TGCGGTCAAA CGCAGAGTAA GTATTTCCTC AACTACGCTT GAAAAGGCAA AGCAGCAGGT GCTTACGCTG AAAGCTACGA AAAATGCGCT TTTAGATCAG GAAAAGCAAT TTGTCGAAGA AATACTCAAA AGAGGCATAG AGGAGACTGA TGAGGTTCCG AATTACGAAA CCGTTTACAT GCGGATTCAG GCAATCGATG AAGCCCTACG AAGGCTCGAA CCCGTAAACA TGAGAGCAAT TGACGAGTAT AATGAGGTAG AGTTAAGACT TTCGGATTTG CAAGGAAAAC GTGACACTCT CTTTACCGAG AGAGAGCAGC TCCTTGAGCG CATCGACCAG TATGAGCATT TAAAACGAGA TGCCTTTATG GAGGCCTATA CAAGCATTAA TGCCAACTTC AAGGAGATTT TCCATGAGCT TTCCGACGGG ATGGGTGAAC TCTTGCTTGA TAACCCTGAT GACCCTTTTG CAGGAGGGAT GACACTTAGG GCACAGCCCA AGGAAAAAAC TCTCCAGCGG ATCGAGGCAA TGTCCGGAGG AGAAAAAAGC CTTACTGCAC TTGCGTTCAT ATTCGCAATC CAGCAATACC GTCCTGCTCC CTTTTATGCC TTTGACGAAA TTGATATGTT TCTTGACGGC TGGAATGTGG AAAGAGTTTC AAGGCGCGTA AAAACCTCAG GATCAAAAGT CCAGTTTATT GTTGTTTCCT TAAGAAAACC TATGATCCAG GCTGCATCCA GGACAATAGG AGTTACAATG CAGGAAAATA ACCTCACGAG CATTACCGGG GTGAAACTTA ATGGCTGA
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Protein sequence | MYIKEIEFVN FKSFGKKVKI PFYNDFTTIS GPNGSGKSNI IDGILFALGL TSSRTLRAEK LTDLIYNGDA SKKPDFAQVT IRFDNSDHKL PLELDEIEVS RKVRRTKNGY YSYFYFNGKS VSLGEVHSQL EKAGITPEGY NVVMQGDVTQ IISMTSVERR KIIDEIAGVA EFDERKQKAL GELEVVKQQI ERVDIILEEV RTQLGKLAGE RDQALKYQAL KTEKVKFEGY LLLSKLKDAR AELQNVEKEI TGKEEHLEKV QIVLNERTKE LQALEETLEK LSVEIRKKGE DEQLQVKREI EETKGEISRC VDSIELSESE LEEADSRRRK AFVEIDSTKG NVEELKEKIE AENLRKESIS SELSERKTER MLLQSRIADV DAKFAATRDE LMAARKKLED AKNEKNELIR TEDRLLDTLR RKSLELREIE NQIKDAEAAV ATSDSDTLSV RYELEKLSEN LESLIRDRDD IESSHFRIKE DIKKLENRLH GLQQEYTITE TRVRASEQGR GYSRAVEMII GAARQEDLFG INGTIAQLGR VERQYSTALE VAAGNRMQAI VVDTDADAAE AIEYLKRRKG GRATFLPLNK LREPRRLENL SYENGVIGYA IDLIQFDSGF EPAFWYVFQD TLVMENLESA RRLMGKARMV TLEGELLEKS GAMVGGSISS KSGTSFAAAE KDKLLELAEK IRSLDESRNA AINKQDSIES HLFELSRKIR DCEATISRKE SQLDEIAGRE AKLAELLEAK QADLKAIEES RTELGTEMDR VTAEKADKEK VVSELEEQIS GLEAKLADSP LPEINKKIEF VDEELRRLDG RIRDTEATLN ALKLEKEYAE QKIAEAKELI REIDEKKASR MEKVNSLKIK IKECEEKLEE KKAREIELSN ELIGLQQERE KVQAEHNAVK RRVSISSTTL EKAKQQVLTL KATKNALLDQ EKQFVEEILK RGIEETDEVP NYETVYMRIQ AIDEALRRLE PVNMRAIDEY NEVELRLSDL QGKRDTLFTE REQLLERIDQ YEHLKRDAFM EAYTSINANF KEIFHELSDG MGELLLDNPD DPFAGGMTLR AQPKEKTLQR IEAMSGGEKS LTALAFIFAI QQYRPAPFYA FDEIDMFLDG WNVERVSRRV KTSGSKVQFI VVSLRKPMIQ AASRTIGVTM QENNLTSITG VKLNG
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