Gene Mbar_A0588 details

Gene Information

• Locus tag: Mbar_A0588
• ID: 3627994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: +
• Start bp: 705489
• End bp: 706154
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637699481
• Product: iron dependent repressor
• Protein accession: YP_304148
• Protein GI: 73668133
• COG category: [K] Transcription; [P] Inorganic ion transport and metabolism
• COG ID: [COG1321] Mn-dependent transcriptional regulator; [COG1918] Fe2+ transport system protein A

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 39
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATATAG ATCGATTTGA AGAATATCTC GAAACTATTC TCTACCTCAT TAGAAAAAAT 
CAGGGCCCTG CAAAGACCAA ACAGATCTCT GAAGAACTCA ACGTATCTCC GCCAAGCGTG 
ACGGAAATGA TAAAAAAGTT ACATTCTTCG GGACTTGTAG AGTATACACC TTATCAGGGA 
GTTGAATTGA CAAAACAAGG GACTGATCAG GCTATAAAGA TCAAAAGGAA ACACCAGGTA 
CTTGAAACTT TCCTGGTTGA TGTCCTAGAT TTTGATAGAA AGGAAGCCCA TAAAGAAGCC 
TGTGAACTTG AGCATGCAGT CTCAGATGCC GTACTTGAAA AGATCTACGA ATTTCTGGGA 
TGCCCCGAGT ATTGCCCTGA CGGAAACCCC ATCAATATTG ATAAAAATAA TATCGTGCAA 
GAGGAAAAAT TTGTCCCGCT TGATGAGATG GAAGAAGGAA GTTCAGGCAG AGTTGCCAGG 
GTTACCCTTC CAAGAGAGAC AAAAGAGCGC CTGATTTCCC TTGGAATTCT TGCAGGAGAA 
GATATAAAAG TCAGGCGAAA GCAAAAACAG GGCTGTATCT CGGTTATAGC AGTGGGGTCG 
GAAATCGCTC TCGGAAAGGA TATTGCAAAG AAAATTTTCA TAGCTCCGAA GGGCAGAAAT 
GCGTAA 

 

Protein sequence

MHIDRFEEYL ETILYLIRKN QGPAKTKQIS EELNVSPPSV TEMIKKLHSS GLVEYTPYQG 
VELTKQGTDQ AIKIKRKHQV LETFLVDVLD FDRKEAHKEA CELEHAVSDA VLEKIYEFLG 
CPEYCPDGNP INIDKNNIVQ EEKFVPLDEM EEGSSGRVAR VTLPRETKER LISLGILAGE 
DIKVRRKQKQ GCISVIAVGS EIALGKDIAK KIFIAPKGRN A