| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0582 |
|---|
| Symbol | |
|---|
| ID | 3627987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 699668 |
|---|
| End bp | 700372 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637699474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304142 |
|---|
| Protein GI | 73668127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3271] Predicted double-glycine peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG ATAATAAGAG TTTGAATATA AGAAAAGCAG CATTTCTTCT AAGCGTTGCT
GGTTTGGTAA TATTAACAGC TATGGGAATG CCTGCAGGCG CCAGTGAGAT CAAAGTTAAA
AGTGTAGTTC CTGAGAATAA CACAACTATG TTGTTACAGG TGCCTGATGT GCGCCAATCC
ACCAACTACT CGTGTGGAGC TTCATGCTTT CAGGCTGTAG TAAGCTACTG GGGCGGTAAA
GATATGGGAG AAGGCCAGTT TATTGAGCTC GTCAATACTA CTCTCGGAGA GACTGACCAC
AAGGGCACCA CCCCCAGCGG CATCGTAGAA GGGGCAGAAA AAATGGGGTT TAGAGCTGAG
ATTAGAGAGA ACCTGACATT GGACGATTTG AGAGACTCCA TTAATAAGGG CATTCCAGTA
ATAGTTAGAC TTCAGGCCTG GAAGAATGAG AATCAAACTT GGGAAATGAA TGCGAGCAGT
CACTACATGG TAGTCATAGG CATAGACAGC AAAAATGTAT ACTTTGAAGA CCCATGGATA
CTTGGCAACA GAGGGTATAT TCCACATGAT GAGTTCATAG AACGTTGGCA TACTTTCAGT
TATGAATCTC CTACAGCTGA TAAAAAAACA AATATGATTC ATATGGGAAT CTTTATCAGT
GGAGACAACC CTGCACAAAA TCCTGGTTTC ATACACGTGG ACTAA
|
|---|
| Protein sequence | MKIDNKSLNI RKAAFLLSVA GLVILTAMGM PAGASEIKVK SVVPENNTTM LLQVPDVRQS
TNYSCGASCF QAVVSYWGGK DMGEGQFIEL VNTTLGETDH KGTTPSGIVE GAEKMGFRAE
IRENLTLDDL RDSINKGIPV IVRLQAWKNE NQTWEMNASS HYMVVIGIDS KNVYFEDPWI
LGNRGYIPHD EFIERWHTFS YESPTADKKT NMIHMGIFIS GDNPAQNPGF IHVD
|
|---|
| |