Gene Mbar_A0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0563 
Symbol 
ID3626156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp672610 
End bp673482 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content42% 
IMG OID637699454 
Producthypothetical protein 
Protein accessionYP_304123 
Protein GI73668108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT TACTAAGTGC TGAGGGCAGC AGTTTACTAC CTCCATTTCA AGACTATGAG 
CCGGAATTAT ATGACATCAG GTCCCATATC TTGCATTTTT ACAGCAATAT TAAGGATCGT
GATTTAAGCA TAATTGCAGA ATCAAATATG ACTGATCTCT ATGAGATATT TTCCGAGCTC
GATGAACTTG GGCATCTGGA TATTTCTGAC GGTCTATGTC AGGCCTTACT TAGAGACCCG
GTGATCAGTT CCGTCCTTCC TGTGATTTAC ACCAGCTATA CTCATTTTTT TAGTCTGCAT
GAGACTCAGC TAGCAAAAAA TATCCTGGCT TGCAAGGAAC CCTGGAAAAT GCTGGAATCT
TTTCCTCTAT ATCCCAGATA CGAAAAAATG ATCAGGACTC AAGTTCAGGC CTCCCCCGGA
ATTAAAGTGC TGGCTTTCAT AGGCTGCGGT CCCCTTCCTG TTACTCTACT TCTTTTCAGT
AAATTATACG GCATCCGTTG CATTGGTGTA GATCAGGACC CTGAAGCGGT GGGTCTGGCA
AAAAGCTGTA TAAAGCACTT TGGGCTTGAA AAGGAAATCA GTATTCTTGA GGGAGACGAA
ACCGTACTTT CAAAAATTGG ATGGGACTCT GTGCTTATAG CAGGACTTGC CGAACCCAAA
CAGCGCATCT TTGAGAACCT ACATATGATG ATAAAAAATC GAAAATCGAG TTCTAAAAAG
CCTGTTTCAG TTTGCTATCG CAACTATAGC GGCATAAGAC AATTGCTATA CTGGCCAGTC
CAGCCGGAAC AGACTAAAGG TTTCAGAAAA ATAAAAGAAA TCTATCCTGC TGGAAAAGTA
AACAATACCC TAGTCTTCAT GGAGTGTGAG TAA
 
Protein sequence
MNSLLSAEGS SLLPPFQDYE PELYDIRSHI LHFYSNIKDR DLSIIAESNM TDLYEIFSEL 
DELGHLDISD GLCQALLRDP VISSVLPVIY TSYTHFFSLH ETQLAKNILA CKEPWKMLES
FPLYPRYEKM IRTQVQASPG IKVLAFIGCG PLPVTLLLFS KLYGIRCIGV DQDPEAVGLA
KSCIKHFGLE KEISILEGDE TVLSKIGWDS VLIAGLAEPK QRIFENLHMM IKNRKSSSKK
PVSVCYRNYS GIRQLLYWPV QPEQTKGFRK IKEIYPAGKV NNTLVFMECE