Gene Mbar_A0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0508 
Symbol 
ID3624248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp611136 
End bp612503 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content47% 
IMG OID637699401 
Productcoenzyme F390 synthetase 
Protein accessionYP_304070 
Protein GI73668055 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR03335] coenzyme F390 synthetase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCTA TAGACAACTC AAAACCTTAT TTCAACCCTG AAATCGAGAC TATGGACAGG 
GAAGAACTGG ATGCTCTCAT AGAGGAACGG GTACGGTACA CGGTAAAATA TGCGGCAGAA
AATTCTCCTT TTTACAGAAA ATGGTTTGAA AAGCAGGGAG TGGACCCGGC TGAGATCAAA
ACCCATGAAG ACCTTCTGGA CCTTCCCATA ATTTCGGGAA ATACCATCCG TGAAAACCAG
CCTCCGGAAA CAAGCGAATT CATGTTCAGG AGTGTAGGCT GGGAGGATGT TTTTACAGTT
CATGAGACCA GCGGAACCAG TGGAAATCCA AAGGGCTTTT TCCTTACATG GGAAGATTGG
GAACGGTATT CGGAAAAATA TGCTCGTATT TTCAGGTCAC AGGGCTTCGG CCCTGGAGAC
AGGGTTGTTG TCTGTGCTTC TTACGGGATG AACGTAGGGG CAAACACCAT GACCTTTGCG
GCCAGGCAGC TTGGTATGAG CATTATTCCT GAGGGCAAGT GCACATTTCC TCTGCGAGTT
ATTGAAGCTT ACAGGCCTAC AGGCATAGTA GGCAGCGTAT TCAAACTTCT GAACCTTGCC
AGAAGGTTAC GGGCAGAGGG CATCGACCCT CGGGAGTCAG GTGTAAATAA ACTGGTTGTG
GGAGGAGAAG CTTTTGCTGA CGAGTCGAGG AATTATCTTT CCGAAATCTG GGGTTGTCCT
GTGTATAACA CCTATGGAAG TACGGAAGGT ACGATGTGCG GTGAGTGTGA TGAGGTGTCA
GGGCTGCATG TGCCTGAAGA TCTTGTCCAT GTTGATATTT ACGACCCCAA TCTCGAGAAT
TATGTACCTG ACGGAGAATG CGGAAGAGTT ATCCTGAGTA CACTGCTGCC TGTTGGGGCA
AAAGCAGGAA CCCTTCTTTT AAACTATGAT ACTGAAGACA CAACTGTGGT GCTTACGCGC
AAACAGTGTC CCTGCGGAAG GACGCATATG AAAATTCTGA CTCCTCAGCG TGAGGCTGAA
ACCGCGTGGG TAGAAGGAAC TCCCTTTAAC CGCGTAGATG TGGAAAGGGG TGTTTTCCAG
CGCGAAAACA TGGACTACCT AACCGGAGAA TATGAAGCTT TTCTTTATGG CACAGAAGAC
GAGGGAGAAA CCGTACTCAG AGTTAGTATG GAATGTGAAA ATCCTGAGGT GTGCGACCGG
GACCTTATAA AACAGAACTT TCTTCGTACT TTTCTCAGAT ATAAGCCTCC GCTTTCAAGG
GCTTATGCCG AAGGCACTTT TAAAATAGTA TTCAATTTCA CAGGTCCTAT GGGGCTTGAA
CTGAACAGGA TAAAAGGCAG GCCTAAAAGG CTTGTAGACA GACGATAA
 
Protein sequence
MLSIDNSKPY FNPEIETMDR EELDALIEER VRYTVKYAAE NSPFYRKWFE KQGVDPAEIK 
THEDLLDLPI ISGNTIRENQ PPETSEFMFR SVGWEDVFTV HETSGTSGNP KGFFLTWEDW
ERYSEKYARI FRSQGFGPGD RVVVCASYGM NVGANTMTFA ARQLGMSIIP EGKCTFPLRV
IEAYRPTGIV GSVFKLLNLA RRLRAEGIDP RESGVNKLVV GGEAFADESR NYLSEIWGCP
VYNTYGSTEG TMCGECDEVS GLHVPEDLVH VDIYDPNLEN YVPDGECGRV ILSTLLPVGA
KAGTLLLNYD TEDTTVVLTR KQCPCGRTHM KILTPQREAE TAWVEGTPFN RVDVERGVFQ
RENMDYLTGE YEAFLYGTED EGETVLRVSM ECENPEVCDR DLIKQNFLRT FLRYKPPLSR
AYAEGTFKIV FNFTGPMGLE LNRIKGRPKR LVDRR