Gene Mbar_A0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0504 
Symbol 
ID3626618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp603929 
End bp606118 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content41% 
IMG OID637699397 
Producthypothetical protein 
Protein accessionYP_304066 
Protein GI73668051 
COG category[S] Function unknown 
COG ID[COG5427] Uncharacterized membrane protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03662] Chlor_Arch_YYY domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGAGT ATCTTCACAT AATTTTCTGG TTTATTTTTA TTGAAATGCT GGGCCTGGTT 
TCCATGCCTC TTGCCGGACT AGCTGGAAAT CGGCTTGTTG ACAGAGGATA TTCTGCAGCA
AGGACTCTGG GAATAGTGCT TGTTACGTAT ATTGCCTGGC TTTTTTCCCA TGTATGGGGC
TTGAACAGCC GCACAATCCT TATCTCGGTA CTTCTACTTT GCCTTATAGC GGGAATTGTC
TATCGAAAAC AAAGGACCTT ACCGGAAAAG AAGATCCTGT TGTCAAATGA GCTCGTATTC
GCTGCAAGCT TCTTTTTTTT CCTGCTTATA CGCATGTATC TTCCTGAGAT CTACAGGCAT
GAAAAATTCA TGGATTTTGC TTTTTTGAAC GCAGTTATGA GAACCTCTTC TTTCCCCCCG
GCAGATCCCT GGTTTGCAGG CGGTTCCCTT GATTTTTATT ACTATTTCGG ATACCTTTCG
GTGGGAGTTC CGGGGAAACT ATTTTCTGTC GAGCCATCCA TGCTTTTCAA TCTGGCTATT
GCTCTCACTT TCGCTCTTTC CTTCAATCTC CTTTTCGGGT TTGGATATAA CCTTACTCAT
GGAAAAATCA GGTATGGGTT TCTTACTGCC TTATTCGTGA TCCTGCTAGG AAACTTGCAG
GGATTTAAAG AATTCATATC CATGTATCTT ACCAGAGAAA CTGCACCAAT GGGATACTAC
TGGAGCAGTT CGAGAGTTAT CCCGTATACA ATAAATGAAT TTCCTTACTT TAGTTTCATA
CATGGAGACC TTCATTCTCA CATGATTGCA ATTCCTTTCC AGCTTCTGGT ACTTGCTTTT
CTCCTTAACA TATATCTCAG GAAAGATAGC AACCGGGTCT TTGAAAGTAT ACTGGAACTT
CTGATTTTTT CAGTATCCCT TGGTTTTTTA TTTCTTTCTA ATTCCTGGGA TTTCCCGATA
TATCTCAGCT TGACATTTGC AGTTGTTTTT GCTTATTACT ACGGGCATTA TCTCCACAGT
AAAAGCTTAT ATATCCACAA TAAAAGCCTA TCTAGATCCG TTACCGGTTT TCTGGGAACA
GTTCTTTCAG TTTTCACTCT CAGCCTTCTT CCGTATTTGC CCTTTTATCT GTCATTTAAA
CCGCAAGCTG CAGGTGGATT CGACTTTGTT CAGCCAGAAC TTCGTACAAC AATTGGAGAA
TTCCTGATCC TGTTCAGCCT TTTCCTTTTT TTGACCCTTT CTTTCCTCAT GACTCACCTT
GACTCCAGAA GAAAAATACA ATATTTCATC CTGTGGATAG GAATATCGGC ATTTCTTGCC
AAAGAATGGA CTATTCCTCT GCTTGGAATC CTTCTTCCGT TACTTGTCCT TTCACTTTAT
TCTTTCCTGA AAGACCTTCC TGAGAGAAGC AATGCAGGAT TCATCTCACT TCTGATAGCA
ATGGCTGCAT TCATAGCGAT TATCTGCGAA GTCATCTTTC TTGATGATCC CATTTCCGGA
AGCTTTGCCC GCATGAATAC GGTTTTCAAA TTTTACATGC ACTTATGGAT TTTTCTGGCC
ATTGCAGCTT CTTATTCCTT CTATCAGCTT TATTTCCGTT ACAGAACCTT TCCCGAGACT
AACCTTCCTA CGAGCAGCAG GGTTTATGAA AAAAAAGTTT GGATGTTCTC ACTTATGCTT
CTGGTTCTCT CATGCAGCGT CTTTCCTGTA GTAGCTACCT TTACAAGAAT AGAAGATATG
AATGCGGAAC CTGCCCTTGA CGGCATGGAA TACATGAAAG AGTTGGATCG CGGAGATTAT
GACGCTATAA AATGGATTCA GGAAAACCTC AGTGGAACTC CGATAATCCT TGAAGCTTCC
TCAGATGACA GCAGTTATCA TTATATCTCG CGTGTCTCGG CAAATACCGG GCTTCCTACG
GTTATTGGGT GGGCAAGGCA TGAGCAGTTC TGGGAAAGAA ACGATGAAGA AATCAGGACA
AGGCTTGAAG ACGTAAATAC CATTTACAGT ACCAGCAGTA AAAAAAAAGC TCTTGAGCTC
ATGAATAAAT ATAACGTAAA CTATGTTTAT ATCGGTCAAC TTGAACGGCA GATGTATGAT
ATAAAAACGG ATAAGTTCGA GGACAAAACT TATTTTGAAC CGGTTTACCA GGGTTCAGTC
CGGATTTATA AAGTAAAAAA GGAGTTCTGA
 
Protein sequence
MLEYLHIIFW FIFIEMLGLV SMPLAGLAGN RLVDRGYSAA RTLGIVLVTY IAWLFSHVWG 
LNSRTILISV LLLCLIAGIV YRKQRTLPEK KILLSNELVF AASFFFFLLI RMYLPEIYRH
EKFMDFAFLN AVMRTSSFPP ADPWFAGGSL DFYYYFGYLS VGVPGKLFSV EPSMLFNLAI
ALTFALSFNL LFGFGYNLTH GKIRYGFLTA LFVILLGNLQ GFKEFISMYL TRETAPMGYY
WSSSRVIPYT INEFPYFSFI HGDLHSHMIA IPFQLLVLAF LLNIYLRKDS NRVFESILEL
LIFSVSLGFL FLSNSWDFPI YLSLTFAVVF AYYYGHYLHS KSLYIHNKSL SRSVTGFLGT
VLSVFTLSLL PYLPFYLSFK PQAAGGFDFV QPELRTTIGE FLILFSLFLF LTLSFLMTHL
DSRRKIQYFI LWIGISAFLA KEWTIPLLGI LLPLLVLSLY SFLKDLPERS NAGFISLLIA
MAAFIAIICE VIFLDDPISG SFARMNTVFK FYMHLWIFLA IAASYSFYQL YFRYRTFPET
NLPTSSRVYE KKVWMFSLML LVLSCSVFPV VATFTRIEDM NAEPALDGME YMKELDRGDY
DAIKWIQENL SGTPIILEAS SDDSSYHYIS RVSANTGLPT VIGWARHEQF WERNDEEIRT
RLEDVNTIYS TSSKKKALEL MNKYNVNYVY IGQLERQMYD IKTDKFEDKT YFEPVYQGSV
RIYKVKKEF