| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0451 |
|---|
| Symbol | |
|---|
| ID | 3624327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 549701 |
|---|
| End bp | 550180 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637699344 |
|---|
| Product | coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| Protein accession | YP_304013 |
|---|
| Protein GI | 73667998 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGC TGTACTCCGA GATTGTGGTG GCAGGCTGCG GCAACCCACT TTTTGCAGAT
GATGGGTTCG GACCTGCAGT TGTGGAGAAA CTCAAGGACC TCAAACTTCC AGAGAATGTC
ACGGTTGTTG ACGCAGGGCT CGGGGGTCCA CATTTTGTTT TTACTCTTCT CAACCCTGAG
TCTACAAAGA CTCTTATTAT TGTGGACATT GCGGACTTTG GTGGGGAACC CGGTGAGCTC
AGGTGGCTCT CTGTTGATGA GCTTCCAGTG GGGAGCTACC GGGACGCCCA CTCATGGGAC
CTGACCGAGC CGCTCCAGTA CATTAAGGAC GATATCCGGA TCCGTGTCCT TGCATGCCAG
AAGAAATACG TTTCTTCTCC CGAGATGGTC ATCGGGATTA CAGACGAGGT ACAGAGAGCC
ATTCCAGACG CTGTATCCGA GATACTAAAG GAAATCGGAG TGAACTATGG GACTGCTTAA
|
|---|
| Protein sequence | METLYSEIVV AGCGNPLFAD DGFGPAVVEK LKDLKLPENV TVVDAGLGGP HFVFTLLNPE
STKTLIIVDI ADFGGEPGEL RWLSVDELPV GSYRDAHSWD LTEPLQYIKD DIRIRVLACQ
KKYVSSPEMV IGITDEVQRA IPDAVSEILK EIGVNYGTA
|
|---|
| |