Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0338 |
Symbol | |
ID | 3626582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 393221 |
End bp | 394024 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637699230 |
Product | GvpL |
Protein accession | YP_303902 |
Protein GI | 73667887 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.52791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAAA CAGAGCAGGA GAACTGCCTT TATGTTTACG CAATTCTCAA TACAGCTACT GAACAGAACC TGGGAACGAT TGGGATTAAC GACAATCCTG TGTATACAAT TATTTATAAA GACATTGCTG CAGCTGTCCA TTTCTCAGAA AAGAAACCTG AACCAGCAAA GGACGAACAG CAGGCAAAAG AATGGGTATT CACTCATAAC TATGCTATCG ACAAGATGAC TGAAAAATTT GGTACATTAC TTCCATTTTC TTTTGGGTGT GTTGCACTTG GAAATGACGA AACCATAAGA TCCTGGCTGC AGAAAAACTA TGAACCCTTT AAAACTGAAC TTGAGAAATT AAATGATACT GCAGAGTATT TAGTCCAAAT TTTTTATGAT CCGAAAATTC TTGCTGAAAA GGTTCTCAAA GACAGTCATG AACTTCAAGC ATTGAATGCA AAAATTCAAG GAATGTCAAA AGGAAAAGGC TACATTCTTC AGAAACAGTT TGATATTCGG CGAGATCAAG CAATAACAAA GGAACTTTCA AAACTTGGGG CAGAATTTGG GAGAGCTATT CACGAGAATG TAAAAGAGAT GGTTCCTGAA GAAAAAAAAT CCAATGTTCC AGAGAAATTC AAGGGCAAAA AATCTGTGAT TACACTTTCC TGCCTTGTAT CTAATGAAAA TGTTGAAAAT TTAGGGAATG TTCTTGAACA AATAAATGAA CGTGAAGGTT TTGCAGTCAG GTTTACAGGA CCCTGGGCAC CTTATAGCTT TATTGATCTC AAAAAGGATT TCGAACATAC ATGA
|
Protein sequence | MNETEQENCL YVYAILNTAT EQNLGTIGIN DNPVYTIIYK DIAAAVHFSE KKPEPAKDEQ QAKEWVFTHN YAIDKMTEKF GTLLPFSFGC VALGNDETIR SWLQKNYEPF KTELEKLNDT AEYLVQIFYD PKILAEKVLK DSHELQALNA KIQGMSKGKG YILQKQFDIR RDQAITKELS KLGAEFGRAI HENVKEMVPE EKKSNVPEKF KGKKSVITLS CLVSNENVEN LGNVLEQINE REGFAVRFTG PWAPYSFIDL KKDFEHT
|
| |