| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0303 |
|---|
| Symbol | |
|---|
| ID | 3626818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 355078 |
|---|
| End bp | 355857 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637699195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303867 |
|---|
| Protein GI | 73667852 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00506761 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCAC GGGAAACTCT TATCAGCGGA GATCTGGTCA TTCAACAGGC AGAACATTAC
CTTAACCCTG AAAGACGACT CTATCTGGCT GGAAAATTTA TTGAGGGTGC CTGTGGGAAT
ATCCTGAGGA ATCTCAGGTA CTATGCAAGG AATAGAGAGG ATATTCAGGA AGCAATCGAA
AGTTATGCAA CTTCTATAGA GTCAGAACTT TCCTGCCTTG AGGGTGCAAA AGCAGTCCCT
TCGATGATGA GAACTGAAGG GAAAATCCGA GAGCTTTATT ATAACGCACT TGATGAGATT
TTCCCAGAGG AATACAGAAT AATAAAACGC ACCCGAAGAC CACCAGAAAA CAAAATGAAT
ACACTCATAA GTTTCGGAAA TTCATTAGTC TATTCCACTA CTCTCTCCGA GATTTATAAT
ACTCAACTTA ATCCTACAAT TTCATACCTG CATGAGCCTT TTGAGCGAAG ATTTTCTCTT
TCTCTTGACG TTAGTGAGAT TTTCAAGCCT ATTCTGGTAG ACAGGATCAT TTTCAAACTG
GTCAACAAAA ACATGCTTGG CGGCAACTGC TTCCGGGGAG AGATAGGGAA TATGCTGCTT
AGCGAAAAAG GGAAGAAAAT CTTCCTTAAA GAATACGATG AAAAACTTAA GACCACTATC
AAACACAAAG GTCTGAACCA GAGTGTCTCT TACAAACGGC TTATACGGCT TGAGCTATAT
AAGCTTTCAA AGCATGTTTT GGGAGCAGAG GAATATAAGC CTCTGGTTAT GTGGTGGTAA
|
|---|
| Protein sequence | MYPRETLISG DLVIQQAEHY LNPERRLYLA GKFIEGACGN ILRNLRYYAR NREDIQEAIE
SYATSIESEL SCLEGAKAVP SMMRTEGKIR ELYYNALDEI FPEEYRIIKR TRRPPENKMN
TLISFGNSLV YSTTLSEIYN TQLNPTISYL HEPFERRFSL SLDVSEIFKP ILVDRIIFKL
VNKNMLGGNC FRGEIGNMLL SEKGKKIFLK EYDEKLKTTI KHKGLNQSVS YKRLIRLELY
KLSKHVLGAE EYKPLVMWW
|
|---|
| |