| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0248 |
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| Symbol | |
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| ID | 3624861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 295319 |
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| End bp | 296335 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637699140 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_303812 |
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| Protein GI | 73667797 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGG CTGTAATCGA AGGTGATGGA ATAGGTAGGG AAATAATCCC TGCAGCTGTT
AAAGTCCTTG ATGCTTTCGG GCTTGAGTTT GAAAAAGTTC CCCTAGAACT TGGCTATACC
CGGTGGGAAA GAACAGGAAC TGCAATATCA AATAATGATC TGGAAACTAT AAAGGGGTGC
GATGCTGTCC TTTTTGGAGC AATTACTACT GTACCGGATC CGAATTACAA AAGCGTGCTC
CTGACCATAC GAAAAGAACT GGATCTGTAT GCTAATGTCA GGCCTGTAAA ACCTCTGCCC
GGCATAACAG GAGTTACCGG GAGAAACGAT TTCGATTTTA TTATTGTCAG GGAAAACACT
GAAGGGCTGT ATTCGGGAAT TGAAGAAATA GGGCCTGAAC TCTCCTGGAC GAAAAGAGTC
GTCACCCGGA AAGGTTCCGA GCGGATTGCA GAATATGCCT GTAAGCTTGC AAAGAAAAGA
AAGAACAAGC TGACCATTGT CCATAAATCC AATGTCCTGA AATCCGACAA GCTGTTCCTC
GATGTTTGCA GGCAAACTGC CAGTGCTAAC GGCGTGGAAT ATGAGGATAT GCTGGTTGAC
TCGATGGCTT ACAACCTTAT TATGCGCCCT GAAAGGTATG ACATTGTGGT TACAACGAAC
CTCTTCGGAG ACATTTTAAG TGATATGTGC GCAGCCCTTG TAGGAAGTCT CGGCCTTGTC
CCAAGCGCCA ATATAGGGGA GAAATATGCC TTCTTCGAAC CTGTGCACGG GAGCGCACCT
GACATTGCCG GAAAGGGCAT TGCAAATCCG CTTGCTGCGA TCCTCTGTGT AAAGATGCTA
CTCGAATGGA TGGGAGAACC TCGATCTCAA ATTATCGATG AGGCAATAGC CTATGTGCTT
CAAAAGAAAA TCATCACTCC TGACCTCGGA GGAACGGCCA GCACAATGGA AGTAGGAAAC
GCAGTTGCGG AATATGTGTT GAGTAATATA CAGGATCGGC GCAGCCCACC CTGGTAA
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| Protein sequence | MRLAVIEGDG IGREIIPAAV KVLDAFGLEF EKVPLELGYT RWERTGTAIS NNDLETIKGC
DAVLFGAITT VPDPNYKSVL LTIRKELDLY ANVRPVKPLP GITGVTGRND FDFIIVRENT
EGLYSGIEEI GPELSWTKRV VTRKGSERIA EYACKLAKKR KNKLTIVHKS NVLKSDKLFL
DVCRQTASAN GVEYEDMLVD SMAYNLIMRP ERYDIVVTTN LFGDILSDMC AALVGSLGLV
PSANIGEKYA FFEPVHGSAP DIAGKGIANP LAAILCVKML LEWMGEPRSQ IIDEAIAYVL
QKKIITPDLG GTASTMEVGN AVAEYVLSNI QDRRSPPW
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