Gene Mbar_A0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0221 
Symbol 
ID3626001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp260990 
End bp261532 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content46% 
IMG OID637699112 
Productnitroreductase 
Protein accessionYP_303785 
Protein GI73667770 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.602782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0189765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA AAGGAGAAAG CAAAGTCATT AACACTATCC TTAACAGACG GAGCGTCCGA 
GAGTTTACGG ACAAACCTGT TAGCAAGAAA GATATCAACA CTATCCTTAA TGCAGGCCAA
TGGGCACCTT CCGGATTGAA TAACCAGCCC TGGCGTTTCA TTGTTATTCG AAACCGTGAG
ACTATCCAGA AACTCTCGGA ATGCACTCAT TACACAGGTA TCGTGGCAGG AGCTCCTCTG
CTTATTGCGA CTTTCCTGGA CAATGAAACT TCTTACAACA GGACAAAAGA TCTCGAGGCA
ATAGGGGCTG CAATCCAGAA TATGCTCCTC AGCTGCTGTG ATCTTGATCT TGGCGGAGTC
TGGCTTGGAG AAATCCTGAA CCAAAAAGAG AAAGTCAATT CCATTCTGGA CTGCCCTTCC
GATCTTGAGC TAATGGCAGT TCTTGCAATC GGAGAACCGG CTCCAAAAGA AAGGACTTCA
ACACGTAGAG CCCTATCCGA AATAGTGTTT GATGAAAAGT ACGGCCAGAA ATGGGAAGAG
TAA
 
Protein sequence
MPVKGESKVI NTILNRRSVR EFTDKPVSKK DINTILNAGQ WAPSGLNNQP WRFIVIRNRE 
TIQKLSECTH YTGIVAGAPL LIATFLDNET SYNRTKDLEA IGAAIQNMLL SCCDLDLGGV
WLGEILNQKE KVNSILDCPS DLELMAVLAI GEPAPKERTS TRRALSEIVF DEKYGQKWEE