| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0175 |
|---|
| Symbol | |
|---|
| ID | 3624478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 197824 |
|---|
| End bp | 199257 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699064 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_303740 |
|---|
| Protein GI | 73667725 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.281463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.284093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTC CGGACCATAA AACAAAGATT GTCTGTACCA TAGGCCCTGC TTCCTCTTCC
GAAGAAGTGA TCAGGAAACT TGTGCTTGCT GGCATGAACG TGGCAAGGAT CAATTTTTCC
CACGGGAGCT TCGAAAGCCA TAGCGAAGTA ATCCAGAGAG TCCGTAAGGT TGCAGAGGAG
CTTGACAGGA CAGTTGCGAT TCTTGCCGAC CTGCCAGGCC CGAAGATCCG TATAGGCAAA
CTGGAAAAAG AACCGATCAT GCTCCATAAA GGAAACTCTG TGACCCTTAC GGTTGCCGAA
ACTACAGGAA ATGAGACACG TATTCCTGTA AGCTACAAGC AACTTCCGGA AAGCGTGGTT
CCAGGGAGCC TTATTTACTT AAGTGACGGT TTTATCCAGC TTCGATGCCT GGAAGTTTCG
GGAAAAGATG TGCTTTGTGA GGTTCTTATC GGAGGGCAGC TCTATTCTCA TAAAGGGCTA
AATCTACCAG GGGCAAAGAT CTTAGTTGAT TCTGTAACTG GAAAGGATCT TGAAATTCTT
GGGTTTGCCC TTAGTAAAGG GATCGACACT TTCAGCATTT CTTTCATAGA AAGTGCGGAA
GATATTCGTA ATGTCCGGAA TTTTGCTGCA GCTAGAGGAA AGTCTGTATA TATTGTTTCT
AAAATCGAAC GCAGGCAAGC TGTAGAGAAT ATCCAGGACA TTCTAAAAGA AACCGATGCT
CTCATGATTG CCAGAGGGGA CCTCGGGGTT GAAATACCTA TTCAGGAAGT TCCTTCAGTC
CAGAAGGAAC TTATCCATAG TGCAAAACTT CTTGGAATTC CGGTAATTAC AGCCACTCAA
ATGCTGGCTT CAATGACTGA TAATATAAGG CCTACCCGCG CAGAAGCAAC CGATGTAGCC
AACGCAATCC TTGACGGCAC AGATGCGGTT ATGCTTTCGG AAGAGACGGC AGTTGGTAAT
TATCCTGTGG AAGCTGTTGA AATGATGGCA AAAATTGCAA AAACCACAGA AGACTGGCGT
TCCGGGACAA AATGGGGACT AGATGCTATT ATCAAGGGCA TAACGGCAAG AGATATGTCA
GTGGATGAGG TAATAACCCT CCAGGTGCAT GAAGCCTTGC AAAAGTTGCC GGTTGCGGCC
GTACTGACTC CCACGAGAAG TGGAGCGACC CCCCGCAGGA TCTCGCGCTT CAAGCCTGAT
ACCTGGATCC TTGCTTTCAG CCGTGTCCCG AGAACCTGCG GCTTCCTCTC TTTATCCTAT
GGCGTTTATC CTATCACTGT GAATGAAAAT ATTGAAAGCT GGGAAAAAGA GACTACTGAG
AAAGCCAAAG ACCTTGGATT TGTAAAAAGC GGAGAGATTG TTATTTTCAC CCAGGGTCCA
TCTTCAGGAA GCCCCGGAGG CACAAATATG CTTAAAATCC TTACCCTTAA ATAA
|
|---|
| Protein sequence | MQIPDHKTKI VCTIGPASSS EEVIRKLVLA GMNVARINFS HGSFESHSEV IQRVRKVAEE
LDRTVAILAD LPGPKIRIGK LEKEPIMLHK GNSVTLTVAE TTGNETRIPV SYKQLPESVV
PGSLIYLSDG FIQLRCLEVS GKDVLCEVLI GGQLYSHKGL NLPGAKILVD SVTGKDLEIL
GFALSKGIDT FSISFIESAE DIRNVRNFAA ARGKSVYIVS KIERRQAVEN IQDILKETDA
LMIARGDLGV EIPIQEVPSV QKELIHSAKL LGIPVITATQ MLASMTDNIR PTRAEATDVA
NAILDGTDAV MLSEETAVGN YPVEAVEMMA KIAKTTEDWR SGTKWGLDAI IKGITARDMS
VDEVITLQVH EALQKLPVAA VLTPTRSGAT PRRISRFKPD TWILAFSRVP RTCGFLSLSY
GVYPITVNEN IESWEKETTE KAKDLGFVKS GEIVIFTQGP SSGSPGGTNM LKILTLK
|
|---|
| |