Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0126 |
Symbol | |
ID | 3625928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 144726 |
End bp | 146558 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637699015 |
Product | hypothetical protein |
Protein accession | YP_303692 |
Protein GI | 73667677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00047965 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.915629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA GATCTTTGAC CTTTTTTCTC CTGTTGTCAA TTTTGGCACT TCTCTTGCTG TCAACGACAG TTCAGGCAGC TGAATACAGA GAAGTTAATA CCAAAGTTAA AGCAGAGGAT ATCCTGAAAA ATATAGAGAG TGGGAAAGAT ATATACCTTG AAAATTGTCG TATAGTCGGT GAACTCAATT TAAGTAATGT TGAACTTAAA AAGGTCTCTA AATATAATCG GATACCTTGG TACTATTACG AAGAGGACCC TGATCCAACT GATAGTGAAG AAGGAGTTGT TGAAGGCAAC ATCACATTCA TTAACTGTAG TTTTGATAGT GACCTCGATT TCTCAAAAGC TCTATTTAGT AGATCTGTTT TATTTCATGA AGTAAATTGT TCTTCCAATG CTACTTTCGG AGCATCCTTT TTTAATGGAA CTTCCAACTT TTATAAGACA ACTTTTAATA GAACCTCAAA TTTCACCTCT ACGAATTTTA ATGATAATGC AAACTTTTCT TTTACAACAT TTAGAGGTCA AACATCCTTC AAGGGAGCGG ATTTTAATGA TACAGCCTAC TTCAATAAAG TCATTTTTGG AAGTAATAGT AATGAAATAA CTGACTTCTG CGATGTGGGT TTTCGCCATT CTGTCTATTT TGAGGAAACA ACTTTTAACG ATATTACTAA CTTTGATAGT ACTTTATTTG ATGGTTTTGC CAGTTTTCAA GGGTCGATAT TTAACAATAC GACCTCCTTC AATGAAGCTA ATTTTCATGA TTTTACCAGT TTTCAAGGGT CGATATTTAA CAATACGACC TCCTTCAATG AGACTAATTT TCATGATTTT GCCAGTTTTG AAAGGTCAAC TTCTAAAGTA GGGTCAACTT CTGCAGTAGA TACTTATTTC AATATGGACT CTTTTGATGG TACTATCAGC TTCAAAAATG TGATTTTTAA AGGCACTTCC GAGTTCTTGA ACGCTTCTTT TGATAGTCCT ACAGAATTTA CTAGTGTACT TTTTAATAAT GATGCATTAT TCCAAGGTGT AAAGTTCAAT GATCGTGTCA AATTTACTCT TGTAAAATTT CAAAGTTCTA CAGATTTCTC AGATGTGGCT TTTAATGATA TTAGCAGCTT TTACGGAGTA AGTTTTAAAG GTCCTACCTA TTTCGGAAAT GGAACTTGGG GGTATTCCAC CCATAGTACA ACTTTTAAAT ATTGTAACTT TTATGAAGTT ACTTTCAATA ATAATGCCGA CTTTGTGGGA CCTTACTCAC CTCGAAATAT ATATTCAGAT GGAGAAAGTA GTCAGACATT TATTGAATAT TACAAAAGAT TCGGGAAATA TGACGAAGCG GATACTATAT ATTATAACTA CCGAGATTCA TCTCTAAAAC ATAAATTAAT TTACGCTGCA AAATCAAAAT CTATCTATGA TACCCCACTT TTGATAGACT TTCTTACTTT AATTACTTGT GGTTACGGTG TAAGACCTTT AAATTCACTC TATTTTGGAA TGATTATGAC TTTCTTATTT TCCATAATCT ATGCAAAAGG TCCAACTATA TCTTTGGTAA GTACTAGTAC CGAAACAACG CCTATTAAAT TTCGTTTTCA GGGACCAGGA ATAGTGCGAA CAGATGCTTC TGAAAATCAG CATCAGAAAG TTTCCTTTTG GGATGCTTTG AATTTTAGCA TAACCACGTT CATTTTTATG AGTCATAATA ACTGGGATGC TAAAGATAAC TTCAGGAAAT GGGCTACCCT TGAAGGAGTT ATTGGTTGGA TAACCCTTGC AATTTTTATG GCTACTCTTA CCAATGTGCT GATAAGGACT TAA
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Protein sequence | MKFRSLTFFL LLSILALLLL STTVQAAEYR EVNTKVKAED ILKNIESGKD IYLENCRIVG ELNLSNVELK KVSKYNRIPW YYYEEDPDPT DSEEGVVEGN ITFINCSFDS DLDFSKALFS RSVLFHEVNC SSNATFGASF FNGTSNFYKT TFNRTSNFTS TNFNDNANFS FTTFRGQTSF KGADFNDTAY FNKVIFGSNS NEITDFCDVG FRHSVYFEET TFNDITNFDS TLFDGFASFQ GSIFNNTTSF NEANFHDFTS FQGSIFNNTT SFNETNFHDF ASFERSTSKV GSTSAVDTYF NMDSFDGTIS FKNVIFKGTS EFLNASFDSP TEFTSVLFNN DALFQGVKFN DRVKFTLVKF QSSTDFSDVA FNDISSFYGV SFKGPTYFGN GTWGYSTHST TFKYCNFYEV TFNNNADFVG PYSPRNIYSD GESSQTFIEY YKRFGKYDEA DTIYYNYRDS SLKHKLIYAA KSKSIYDTPL LIDFLTLITC GYGVRPLNSL YFGMIMTFLF SIIYAKGPTI SLVSTSTETT PIKFRFQGPG IVRTDASENQ HQKVSFWDAL NFSITTFIFM SHNNWDAKDN FRKWATLEGV IGWITLAIFM ATLTNVLIRT
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