Gene Mbar_A0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0112 
Symbol 
ID3625914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp124070 
End bp125962 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content40% 
IMG OID637699002 
Producthypothetical protein 
Protein accessionYP_303679 
Protein GI73667664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCCTA AAGAAATTAA GCCAACGAAT CCAGTTTTTA CATTTATCAA AAATCCAAAG 
AATAAAGAAA GTTTGAGACT CCTGTTTTTG CTTCCTGTGT TCCTGTTTCT AATTATTTCT
CCCGGAGCAG CTGCATCAAG CAACTGGGAG CTTACTCCCC AAAACCCCGT TGTTGGGGAT
ATGATGAAGA TAAAAGGAAC CGGTTTTGAG GGAGATACCG CAAAAGTGCT GGTATCCTTC
GAAAAAGATG TGAAGGTACA GGATGGAAAA TACGAGTACC TGCTTGAAGA TGTAGTAATC
CCATCTGGTT TCGACAACAG TTTTACCGTG AAGGCAGAAG GAGTCGAGGA TCTGAATGTG
AGAGCAAAGA CGCTCCTATG GTTAACTAAA AGCTCAGAAG CAAAAGACGG CACCGCCACA
GTATCCCAGG CAAACGTCCC TGCAGGAACA TATGAGATCA GGATCGACGG AAAGGCAAGT
GGTTCTAATG TCAAACTCAA GATAACAGCC ATGCAAAAGA TAGAGGTAGA TTCTGATAGA
AGTCTCAGCT ATGAATATAA TACTAAGTCT ATACCGGCAG GCAATTTTGA AGTAAACGTT
GAGGGCATTA CAAAGCAGAT AGAATTACAG TCTGAAGAAG GCCTTCTTTC AGAAATAGAC
TCTGTGGAAC AGAACTTTTC AGAAACAAAC TCTTCGAAAC AGAACTTTTC AGAAACAAAC
TCTTCGAAAC AGAACTTTTC AGAAACAAAC TCTTCGAAAC AGAACTTGAA TGAAGAACAA
AATAACGAAA GTCTGCCTTC GGAAACAAAT TCATTGGAAC AGAATTTAAG TGAAGGAAAA
GATAATGAAA GCCCAGGAGA TACACCTGAA GTAAAAGTAT ATAACTGGAC AGACATCCAG
GGAAACAAGT CGGCAATATC TGAAATAAAA ACAAAGAAAA ATAGCTGGAA CAATCTGAAA
TTCATATTGT CATATCCATA CTCCCTTCGT CCGTTTTATA CCGTAAACGA GAGCTTAAAG
TTGAGCTACA ATGGACCTGA AGCTTTAGGA CAGCAGAGTG TGGACATATA TCTCATCAAG
GAACGAAGCC AGAGTTCTCC GGAAAATGAG ATTTCATATG GTATGAATGA CAGCACAATT
AGTCTTGAAG ATGTCTTAAA CAATGCTACA GAAGCTTATG TCAAGATACC TGCGACCCTG
AACAAAGAAG GAGATCTTAC TCCCCTAACA TTGGGCCCTC TTCAGGCAGG CCGCTACTGG
ATCCTTATAA CCACCGCAGG AAACGAAACA GAAAAAACAG TATCTGAAAA AGAAGTCCTT
TTAGCAAAAT ATTTTGAAGT TCTCAAGTAT CAAATGGAAG CCAGAGCTCC GTCTACCCTT
CAAGAAGGCG AAAACTTAGA AGTTAACCTG GATCTGAAGA ACGCACCTGC TGTGAAAAAT
TATACTTACT GGGCTGTACT GATAAAGGAT GGTACCTATA CAGCATCTGA AGACACTAAC
TCAATCGGGA CGACAACCAA AATAAGGCCT ATTGTGAACG GAATTGACCT TATAAAGAAT
TTGGAAACCA ATTTGAGTGG ATATGAATCT GAAAATGAGA AAGACGAACT TAAGAATGAG
ATCCAGACCC TTATAGGGAA AAATAATGGA ACGATAAGCA TAGGTGAGAA AAACCAGAGT
AAGCTTTCCC TGAAAAGCCT GGATCTTCCA CCAGGAGACT ACGTCCTCCT TACAGGAGCT
TATGAAAATA ATGAAGGCCT GGTTGGTATA TCCCAGAAAA AGCTGAGAAT ATCCCTCGAA
AATTCGTATG GACTGGACTT GAGATCCATA TCCGGAAAAT ACCTTAAGTA TATCGTCGAT
GAAGTTAATA GCCTCTCCGC TTATGGAAAT TAA
 
Protein sequence
MLPKEIKPTN PVFTFIKNPK NKESLRLLFL LPVFLFLIIS PGAAASSNWE LTPQNPVVGD 
MMKIKGTGFE GDTAKVLVSF EKDVKVQDGK YEYLLEDVVI PSGFDNSFTV KAEGVEDLNV
RAKTLLWLTK SSEAKDGTAT VSQANVPAGT YEIRIDGKAS GSNVKLKITA MQKIEVDSDR
SLSYEYNTKS IPAGNFEVNV EGITKQIELQ SEEGLLSEID SVEQNFSETN SSKQNFSETN
SSKQNFSETN SSKQNLNEEQ NNESLPSETN SLEQNLSEGK DNESPGDTPE VKVYNWTDIQ
GNKSAISEIK TKKNSWNNLK FILSYPYSLR PFYTVNESLK LSYNGPEALG QQSVDIYLIK
ERSQSSPENE ISYGMNDSTI SLEDVLNNAT EAYVKIPATL NKEGDLTPLT LGPLQAGRYW
ILITTAGNET EKTVSEKEVL LAKYFEVLKY QMEARAPSTL QEGENLEVNL DLKNAPAVKN
YTYWAVLIKD GTYTASEDTN SIGTTTKIRP IVNGIDLIKN LETNLSGYES ENEKDELKNE
IQTLIGKNNG TISIGEKNQS KLSLKSLDLP PGDYVLLTGA YENNEGLVGI SQKKLRISLE
NSYGLDLRSI SGKYLKYIVD EVNSLSAYGN