Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0112 |
Symbol | |
ID | 3625914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 124070 |
End bp | 125962 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637699002 |
Product | hypothetical protein |
Protein accession | YP_303679 |
Protein GI | 73667664 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCTTCCTA AAGAAATTAA GCCAACGAAT CCAGTTTTTA CATTTATCAA AAATCCAAAG AATAAAGAAA GTTTGAGACT CCTGTTTTTG CTTCCTGTGT TCCTGTTTCT AATTATTTCT CCCGGAGCAG CTGCATCAAG CAACTGGGAG CTTACTCCCC AAAACCCCGT TGTTGGGGAT ATGATGAAGA TAAAAGGAAC CGGTTTTGAG GGAGATACCG CAAAAGTGCT GGTATCCTTC GAAAAAGATG TGAAGGTACA GGATGGAAAA TACGAGTACC TGCTTGAAGA TGTAGTAATC CCATCTGGTT TCGACAACAG TTTTACCGTG AAGGCAGAAG GAGTCGAGGA TCTGAATGTG AGAGCAAAGA CGCTCCTATG GTTAACTAAA AGCTCAGAAG CAAAAGACGG CACCGCCACA GTATCCCAGG CAAACGTCCC TGCAGGAACA TATGAGATCA GGATCGACGG AAAGGCAAGT GGTTCTAATG TCAAACTCAA GATAACAGCC ATGCAAAAGA TAGAGGTAGA TTCTGATAGA AGTCTCAGCT ATGAATATAA TACTAAGTCT ATACCGGCAG GCAATTTTGA AGTAAACGTT GAGGGCATTA CAAAGCAGAT AGAATTACAG TCTGAAGAAG GCCTTCTTTC AGAAATAGAC TCTGTGGAAC AGAACTTTTC AGAAACAAAC TCTTCGAAAC AGAACTTTTC AGAAACAAAC TCTTCGAAAC AGAACTTTTC AGAAACAAAC TCTTCGAAAC AGAACTTGAA TGAAGAACAA AATAACGAAA GTCTGCCTTC GGAAACAAAT TCATTGGAAC AGAATTTAAG TGAAGGAAAA GATAATGAAA GCCCAGGAGA TACACCTGAA GTAAAAGTAT ATAACTGGAC AGACATCCAG GGAAACAAGT CGGCAATATC TGAAATAAAA ACAAAGAAAA ATAGCTGGAA CAATCTGAAA TTCATATTGT CATATCCATA CTCCCTTCGT CCGTTTTATA CCGTAAACGA GAGCTTAAAG TTGAGCTACA ATGGACCTGA AGCTTTAGGA CAGCAGAGTG TGGACATATA TCTCATCAAG GAACGAAGCC AGAGTTCTCC GGAAAATGAG ATTTCATATG GTATGAATGA CAGCACAATT AGTCTTGAAG ATGTCTTAAA CAATGCTACA GAAGCTTATG TCAAGATACC TGCGACCCTG AACAAAGAAG GAGATCTTAC TCCCCTAACA TTGGGCCCTC TTCAGGCAGG CCGCTACTGG ATCCTTATAA CCACCGCAGG AAACGAAACA GAAAAAACAG TATCTGAAAA AGAAGTCCTT TTAGCAAAAT ATTTTGAAGT TCTCAAGTAT CAAATGGAAG CCAGAGCTCC GTCTACCCTT CAAGAAGGCG AAAACTTAGA AGTTAACCTG GATCTGAAGA ACGCACCTGC TGTGAAAAAT TATACTTACT GGGCTGTACT GATAAAGGAT GGTACCTATA CAGCATCTGA AGACACTAAC TCAATCGGGA CGACAACCAA AATAAGGCCT ATTGTGAACG GAATTGACCT TATAAAGAAT TTGGAAACCA ATTTGAGTGG ATATGAATCT GAAAATGAGA AAGACGAACT TAAGAATGAG ATCCAGACCC TTATAGGGAA AAATAATGGA ACGATAAGCA TAGGTGAGAA AAACCAGAGT AAGCTTTCCC TGAAAAGCCT GGATCTTCCA CCAGGAGACT ACGTCCTCCT TACAGGAGCT TATGAAAATA ATGAAGGCCT GGTTGGTATA TCCCAGAAAA AGCTGAGAAT ATCCCTCGAA AATTCGTATG GACTGGACTT GAGATCCATA TCCGGAAAAT ACCTTAAGTA TATCGTCGAT GAAGTTAATA GCCTCTCCGC TTATGGAAAT TAA
|
Protein sequence | MLPKEIKPTN PVFTFIKNPK NKESLRLLFL LPVFLFLIIS PGAAASSNWE LTPQNPVVGD MMKIKGTGFE GDTAKVLVSF EKDVKVQDGK YEYLLEDVVI PSGFDNSFTV KAEGVEDLNV RAKTLLWLTK SSEAKDGTAT VSQANVPAGT YEIRIDGKAS GSNVKLKITA MQKIEVDSDR SLSYEYNTKS IPAGNFEVNV EGITKQIELQ SEEGLLSEID SVEQNFSETN SSKQNFSETN SSKQNFSETN SSKQNLNEEQ NNESLPSETN SLEQNLSEGK DNESPGDTPE VKVYNWTDIQ GNKSAISEIK TKKNSWNNLK FILSYPYSLR PFYTVNESLK LSYNGPEALG QQSVDIYLIK ERSQSSPENE ISYGMNDSTI SLEDVLNNAT EAYVKIPATL NKEGDLTPLT LGPLQAGRYW ILITTAGNET EKTVSEKEVL LAKYFEVLKY QMEARAPSTL QEGENLEVNL DLKNAPAVKN YTYWAVLIKD GTYTASEDTN SIGTTTKIRP IVNGIDLIKN LETNLSGYES ENEKDELKNE IQTLIGKNNG TISIGEKNQS KLSLKSLDLP PGDYVLLTGA YENNEGLVGI SQKKLRISLE NSYGLDLRSI SGKYLKYIVD EVNSLSAYGN
|
| |