Gene Mbar_A0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0107 
Symbolrpl2p 
ID3626229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp115078 
End bp115794 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID637698997 
Product50S ribosomal protein L2P 
Protein accessionYP_303674 
Protein GI73667659 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA GAATCATATC ACAAAACAGG GGTAGAGGTA CTCCTACCTA CAGAGCTCCT 
TCTCATAAGT ACAAGGCAGA ACTGAGGCAT CCCCGTGTAG ATGAGAACAC GTCGATTCAG
GGGAAAGTAA TTAATCTCGA GCACGATCCT GCTCGCTCAG CTCCAATAGC AAAAGTTGTC
TTTGAAACTG GGGAAGAACG TCTCCTGCTC GCCTCAGAAG GAATTGCAGT AGGGAGCACA
ATCGAGTGCG GAGATGATGC CGATGTCAGG CCAGGAAATA TAGTTCCTAT CGGAAAGGTG
CCTGAAGGTT TCTTTATCTG CAACATCGAG TCAAAGCCAA ATGACGGTGG CAGATTCGTG
CGCTCTTCCG GTGTATACGC AACAGTCGTA ACCCACGAGT CTAACAGGAC TGCAGTGGCA
ATGCCTTCAG GTAACATTAA ATGGCTTAAT CCAAAGTGCA GAGCAGTTGT CGGTATCGTT
GCAGGTGGAG GTCGGGTGGA CAGGCCATGG CTCAAAGCCG GAAAAAAATA CCACAAAATG
AAAACAAGAG CTGCAAAGTA TCCCAGGGTT TCAGGTGTTG CCATGAACCC GGTTGACCAC
CCATTCGGTG GAGGTGCCTG GAAGCACCCG GGCAAACCCA CAACGGTTAG CAGAAACGCT
CCGCCTGGAA GGAAGGTCGG ACTGATTGCA GCTAGAAGGA CCGGAATGAA GCGCTGA
 
Protein sequence
MGKRIISQNR GRGTPTYRAP SHKYKAELRH PRVDENTSIQ GKVINLEHDP ARSAPIAKVV 
FETGEERLLL ASEGIAVGST IECGDDADVR PGNIVPIGKV PEGFFICNIE SKPNDGGRFV
RSSGVYATVV THESNRTAVA MPSGNIKWLN PKCRAVVGIV AGGGRVDRPW LKAGKKYHKM
KTRAAKYPRV SGVAMNPVDH PFGGGAWKHP GKPTTVSRNA PPGRKVGLIA ARRTGMKR