| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0765 |
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| Symbol | |
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| ID | 3618324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | + |
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| Start bp | 1073495 |
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| End bp | 1076881 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 637698710 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_303394 |
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| Protein GI | 73667378 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.267338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA TTAATAAATT TCTCAACATT CCACATACAT TTGAGCCATT TGTTATTATA
AAAATGTATG CCAAAAAACT TATCAATTCT GCAATATATA TAGTAGATAA AGAAACACAA
TTACATGATC TAGCATCAAT ATTTAAGTTC TATATTCCAA GTCTTGAAGT AATAACATTC
CCTGCATGGA ATGCAATCCC ATACAAAAAA AATTCTCCAC ACAATTCAGT AATGGCAGAA
CGAATTAAAG TTCTATATTC ACTAACTACT AAATGCAATA ACACACCTTA CATTATCCTT
TCAACAACTA ATGCAATTAT GCAAAAAGTA CTCCCTCAAA ATATTATATT ACAGTCAGTA
CTAAAAATTA CACTACAACA AAACATTACA AAACACGATA TAGAATACTA TTTAACACAT
TACGGATATA ATCAATATTC AATAGTACAG GACACAGGTG AGTTTGCTAT TCTCAATAAT
AGTATTGACA TCTTCCCAAT GACTTACAAA AATCCTATAA GAATTCATCT ACACAATAAT
TTTATACAAT CTATCAATTA TTTTAATCAT ACCACACAAC TAATAGACAA CAACTCCTTT
TTAGATGAGA TTTTAATCTA TCCAACTTCT GAACTAATCA AACAAAAAGC AACTATAGAT
CTCTTTTCTA GAATCTACAA AACAAAAACA AACCAAGATC AAAATTTATT AGATACAATA
ATTTCCGGTA AGAAACATAC AGGAGAAGAA AATTTTTTAC CTTTATTCTA CAAAGAAGAA
TTAAAAAATA TTTTCAATTA TATACCACAA AACTCTACAG TTATTTTTAG TGATAGAATC
ATCAACGAAA TAGAACAATA TAATAGCCAA ATATATTTAA ATTATAAATC TCAATTATTT
TATCAAGTAC CTCCACATCA ATTTTATATT AATCTTGAAG ATTTTAAAAC TATAACTCAA
CAGTTTAATA AGATTGTATT CTCACAACAT AATAGTGCTA ATAACAACAA TTCCACATCT
ATAAATGCAC AAAGTTTTAA TATTACAACA CAAATTCAAC ATGTTCCAAA CTTTAAAGTT
TTAGCACAAG ATAAACAAGC CAACATATTT GAAATCCTAA CACAATACAT TAATACTACA
TGTCAGACAA AAAAACTAAT AATAGCATGC AATTCCATCG GCTCCTTAGA ATACATACAA
AATAAACTTA AAACATTAGG TATTAAACTA TATAAAATCA ATCATTACCA AGAGATATTT
TACTCACATA ACATCACTAT ATTACCAACC AATCAAAGTT TTATAACAAA ATCCACCATC
GTCATAACAG AACATGATTT ACTATATAAA CAAGAAGTGA CAAATAAAAG TAACATCTCA
AATATTATTA ATAATAATAC CAATTTAGAC ATTGGTGACA TAGTAATACA CAAAGATTAT
GGTATTGGAA AGATAGTAGA ACTTGAAACT ACTAAAGTAC TTGATAGCTA CCATGATTTT
ATAAAAATAG AGTATTATAA TAATGACAAA CTATTTTTAC CTGTAGAAAA CATCAATCTT
ATATCTAAAT ACGGACAACA AAATCCTAAC GTTACACTAG ACAAACTAGG TAGCACATCA
TGGCAACAAC GTAAAACTAA AATAAAAAAC CACATCAAAA AAATTGCAAG AGAATTATTA
GCTATAGAAG CAGCAAGGAA ATTATCCACG GGTCAAATCT TTTGCAAAGA TGAAAATTAT
CAACATTTCT GTAACGAATT TTCTTATACG GAAACAGAAG ATCAATTACA AGCCATAAAA
GATATGGAAC ATGACCTATC AAGTGGCAAA ATAATGAACA GATTAATTTG TGGAGACGTA
GGTTTCGGAA AAACAGAAAT AGCACTACGT GCAGCATTCT TAGTAGCAAA TAAGAATTAT
CAAGTAGCAG TTATAGTTCC AACAACTTTA TTATGTAGGC AGCATTTTAT TGTGTTTACC
GAAAGATTCA AAAAATTTCC AAATATCAAA ATCAAACAAC TATCTAAAAT AGTTGAAAGA
TCTGAAATCA AGAAAACAAA AGAAAGTTTA TCATGTGGTC AAGTACAGAT AATAATAGGA
ACACATGCTA TATTAGCAAA GGATGTGACT TTTGCTAACC TAAGTTTGTT AATTATAGAT
GAAGAACAAC AGTTTGGAGT AAAACAAAAA GAATCATTAA AAAAAATAAA AACAAACGTT
CATGTAATTT CATTATCTGC AACTCCAATA CCACGCACAC TATACATGTC ATTATGTGGA
ATAAAAGATT TAAGTTTAAT AAAGACATCA CCAAAAAACA GATTACCAGT AACAATTTGC
ACAACACACT ATGACGATAC CATAATAAAA GATGCCATAA TACGTGAACA CAATAGAGGA
GGTAGAGTAT TTTACGTTTG CCCACAAATT AGCAATATAA AAAGCATTAG TGATAACCTA
ACAAAATTAG TACCAGGAAT TAAAATTAAT ACTGCTCATG GACAACTTCC ACCAACACAG
CTTGATACAA TAATGAATGA TTTCTTTGAC GGTAAATTTA CAATATTACT CACTACATCA
ATTATAGAAT GCGGATTAGA TATTCCATTT GCTAACACAA TAATCATACA TAATGCAGAC
ATGTTTGGAT TAGCTCAACT TTACCAACTA AAAGGCAGAG TAGGACGTAG CAACATAAAA
GGTTTTGTAT ATTTTATATT ATCAGAAAAA GTAACAAATA AACCTACTAC CAAACTAGAA
ATTATACAAT CAATAAATTC TATAAGTTCA GGATTTACTT TATCACTACA TGATATGGAT
ATCAGAGGAT TTGGAAATTT AGTAGGAGAA GAACAATCAG GCAATATAAA AGATGTAGGG
ATCGAATTAT ATCAACAAAT GCTAGAAGAA GAACTTAATA TTCACAATGA AAATCCTAAA
GATTTTGATC ATATAAATAT TAGTATCAAT GTTAACATCA GAATTCCTGA ACATTATATC
AAAGACATAG GACTAAGAAT GCGTGTATAC AAAAAAATTG GCAATCTTAA GACAAAACAA
GAGATAGATA ACTATCATAT AGAGTTAATC AACAAGTTTG GCAATTTACC AAATGAAGTA
GAAAATTTAC TAAACACTAT ATATATAAAG CAACTGTGTG CAAACATTGG TATCTACGAA
ATTGAGCAAG TAAAGAATAT CATCTACCTA AGGATTCAGA GTAATACAAC TTTCAAGCAA
GAAGCACTTA ATTATTTTAT CAATAATCCT CTGATTTTCA AAATACAAAA TAACAGCATA
TTAATGTTAA TCAACAATAG CTCTTATTGT ACTACAAGTT TTATTATACA CCATCTTGGT
AAAATAAACG CATTAAACTC AAGATAA
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| Protein sequence | MGNINKFLNI PHTFEPFVII KMYAKKLINS AIYIVDKETQ LHDLASIFKF YIPSLEVITF
PAWNAIPYKK NSPHNSVMAE RIKVLYSLTT KCNNTPYIIL STTNAIMQKV LPQNIILQSV
LKITLQQNIT KHDIEYYLTH YGYNQYSIVQ DTGEFAILNN SIDIFPMTYK NPIRIHLHNN
FIQSINYFNH TTQLIDNNSF LDEILIYPTS ELIKQKATID LFSRIYKTKT NQDQNLLDTI
ISGKKHTGEE NFLPLFYKEE LKNIFNYIPQ NSTVIFSDRI INEIEQYNSQ IYLNYKSQLF
YQVPPHQFYI NLEDFKTITQ QFNKIVFSQH NSANNNNSTS INAQSFNITT QIQHVPNFKV
LAQDKQANIF EILTQYINTT CQTKKLIIAC NSIGSLEYIQ NKLKTLGIKL YKINHYQEIF
YSHNITILPT NQSFITKSTI VITEHDLLYK QEVTNKSNIS NIINNNTNLD IGDIVIHKDY
GIGKIVELET TKVLDSYHDF IKIEYYNNDK LFLPVENINL ISKYGQQNPN VTLDKLGSTS
WQQRKTKIKN HIKKIARELL AIEAARKLST GQIFCKDENY QHFCNEFSYT ETEDQLQAIK
DMEHDLSSGK IMNRLICGDV GFGKTEIALR AAFLVANKNY QVAVIVPTTL LCRQHFIVFT
ERFKKFPNIK IKQLSKIVER SEIKKTKESL SCGQVQIIIG THAILAKDVT FANLSLLIID
EEQQFGVKQK ESLKKIKTNV HVISLSATPI PRTLYMSLCG IKDLSLIKTS PKNRLPVTIC
TTHYDDTIIK DAIIREHNRG GRVFYVCPQI SNIKSISDNL TKLVPGIKIN TAHGQLPPTQ
LDTIMNDFFD GKFTILLTTS IIECGLDIPF ANTIIIHNAD MFGLAQLYQL KGRVGRSNIK
GFVYFILSEK VTNKPTTKLE IIQSINSISS GFTLSLHDMD IRGFGNLVGE EQSGNIKDVG
IELYQQMLEE ELNIHNENPK DFDHINISIN VNIRIPEHYI KDIGLRMRVY KKIGNLKTKQ
EIDNYHIELI NKFGNLPNEV ENLLNTIYIK QLCANIGIYE IEQVKNIIYL RIQSNTTFKQ
EALNYFINNP LIFKIQNNSI LMLINNSSYC TTSFIIHHLG KINALNSR
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