| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0555 |
|---|
| Symbol | |
|---|
| ID | 3617939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 810931 |
|---|
| End bp | 812757 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637698500 |
|---|
| Product | ribonuclease E |
|---|
| Protein accession | YP_303188 |
|---|
| Protein GI | 73667172 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGAATC ATAATAAAAG GATATTAATT GATGCAGTAT ATCAGGATGG AATTAGAGTA
GCAGTATTAC GTGATGGGCA AGTTGTAGAA TTTGATCAGG AATCAAAAGA TAAGAAATGT
TTAAAAGGTA ATGTGTATTG TGCTGTGGTG AAGCGTATAG AACCGTCTTT ACAAGCAGTT
TTTATTGAAT ATGGGGCAAA TAAACATGGG TTTTTGCCTT TTTCGGAGAT ATCATTAGAT
TACTATAATA TTTCTGAAGA GGAGAAGGAA AAGTTATATC AGATCTTGTA TGAAGATTCT
GATATAAAAA ATGATGATGA TGTAAAATCT GTAGATGATT CTGTTGTATG TGATAATAAA
GATCAAGATG ATGTTAATGA TTATAATGAA AAATTGACAT TATTGAAAAA AGATAATTCA
AAAGGTAGTT ATAACAAATC TAAATTACCT TTTTATAAGT TGTATAAGGT ACAGGATGTA
ATAAAACTTG AGCAGAAACT AATGGCTCAA ATTATCAAAG AAGAGCGTGG AAATAAAGGT
GCTACCTTCT CAACTTTTAT TACTTTGGTT GGTAGGTATT GTATATTTAT GCCGAATTCT
GGTAATAAGA ATAGCGGAAT ATCACGGCGT ATTGAAGATG CTGATGATAG AAAAACTTTA
AAAAATTTTC TGAATGTAAT AAAGCTGCCA AAAGAATCTG GAATGATTAT TAGAACTGCT
GGGTCTAATA AAAGTCAGAA AGAGATAGAA CAGGATCTGT CTTATTTACA ATCAACTTGG
CGCAGTATAC AAAATAGTTA TGTGAGTATT ACTGTGCCAT CATTGTTGTA TGTTGAAGGT
GATATAATAA AAAGGACATT AAGGGATTAT TGTGATGAAA ATACACAAGA CATAATTGTA
TCTGGTAGCT ATGCATATGA ATTAGCAAAA GAATGTGTTA AGTTTATGTT TAGGAACAGA
GTACGTCTTA GAATTTATAA AGGCAGTGTT CCTATTTTTT CTTATTATAA AATTGAGTCG
CAAATTTGTG AGTTATATGG GAATATAGTT AATTTACCTT CTGGTGGCTA TATGGTTATT
ACTCCTACAG AAGCACTTGT GTCAATAGAT GTTAATTCTG GCAAAATGAC AGGTGAAGAC
AGTATTGAGG AAACAGCTTA TAAAACAAAT ATGGAAGCTG TTAAGGAAAT TGCTAGGCAA
GTGAATTTGC GTGGGTTGTC CGGGTTAATA GTAATAGATT TTATCGATAT GTTGAAATAC
AGATATTGTA GGTCGGTAGA ATCTGAAATT AAAGAAGCTT TTAAGTATGA TAAAGCAAAA
GTACAATTTG GTTATATCAG CACATTTGGA TTGATGGAGA TATCGAGACA AAGAGTTAAG
CAGAGTATAC TAGAAGCAAA TACAGTGCAA TGTTCACATT GTAACGGTGT AGGTAGAGTG
AGGTCATTAG AATCTTCTTC TGGTGATATA TTACGTGATA TTAGATACTG TGCTAATAAG
AATCGTAATA AACTAATAAA TATTTCTGTT GCTGGACAAA TGATAGAATA TTTTTTTAAC
AATAAACGTC AACATATTGC TGAAATTGAA GAAGAATTTA GTGTATCAGT AAAGTTAACT
GTTAATCAGA ATACTAGTAA TATATCAGAT TTTAATATTA ATGTTGAGAA TGATGATATA
TCAAATCAAA ATAAAGATGT AGTCAATATA TTTACTGTTG ACTATAAAAT TTCTGAAGAT
AATAAATTGA AAGAAGAAAT GCAAGATACT TCTACTGGAA GTATGTGGAT AAAGAAGTGG
TTAACACGTA TATTTTCAAG TATTTAA
|
|---|
| Protein sequence | MSNHNKRILI DAVYQDGIRV AVLRDGQVVE FDQESKDKKC LKGNVYCAVV KRIEPSLQAV
FIEYGANKHG FLPFSEISLD YYNISEEEKE KLYQILYEDS DIKNDDDVKS VDDSVVCDNK
DQDDVNDYNE KLTLLKKDNS KGSYNKSKLP FYKLYKVQDV IKLEQKLMAQ IIKEERGNKG
ATFSTFITLV GRYCIFMPNS GNKNSGISRR IEDADDRKTL KNFLNVIKLP KESGMIIRTA
GSNKSQKEIE QDLSYLQSTW RSIQNSYVSI TVPSLLYVEG DIIKRTLRDY CDENTQDIIV
SGSYAYELAK ECVKFMFRNR VRLRIYKGSV PIFSYYKIES QICELYGNIV NLPSGGYMVI
TPTEALVSID VNSGKMTGED SIEETAYKTN MEAVKEIARQ VNLRGLSGLI VIDFIDMLKY
RYCRSVESEI KEAFKYDKAK VQFGYISTFG LMEISRQRVK QSILEANTVQ CSHCNGVGRV
RSLESSSGDI LRDIRYCANK NRNKLINISV AGQMIEYFFN NKRQHIAEIE EEFSVSVKLT
VNQNTSNISD FNINVENDDI SNQNKDVVNI FTVDYKISED NKLKEEMQDT STGSMWIKKW
LTRIFSSI
|
|---|
| |