Gene Mbar_B3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_B3747 
Symbol 
ID3617463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007349 
Strand
Start bp7921 
End bp9111 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content32% 
IMG OID637695323 
Producthypothetical protein 
Protein accessionYP_300078 
Protein GI73663832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.652201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG ATGTCCTTGT GGATAATTCC ATAAAATCGC TTTATGAGTG GGTAAAAAGT 
GAAGAGTACT ATGGATGGGA CCCTTATGAT GCACTAAACA GTGAAATGAT AAACAAATTC
TGTTCGGACT CTCAGCTACT GGAGATATTG ATAACTCAAT TGAATAAGTA TTCTATCTTA
AACATCAGGC CAATTATAGG TATTGAAAAA GGGCTGGATA TAAAAGGTAT ATCCCTTTTT
GCTCAATCGT TTTCAAAAAT TTATACTTTA ACAAATGATC AACGGTATAA AAGTGATCTA
TTTGAGTGTA CCAATATTTT AAAAAATAAA TCTCTCAAAC AAAAGTATGA TTTTGATTGC
TGGGCAGGAC ATTATTTTAA CTATCGGAGC TTCGATGGAA GTATATTAAC TCCAGATATA
CCTGATGTTA TCACAACATC AAATGTGATC AAAGCAATGG CTGACAGTTA TCTAATTTTT
AAGGATGATG AATTAAAAGA GATTGTAAAA AGTGCCTATG ATTTCTTTAT CAGATATCTA
CTGGAAAAAA CAGACGAGGG CCTTTATTAC CTAAAGTACA ATACTTTAAG TGAAAATAAA
ATCGTAATAA ATGCTTCTGC TGAAGGTTTA AGTGCAATAT GCAGGTTAAT GCCTCTATTT
GACGATAATG AGATGAAAAG AATAGCATTC AAGCTTTCCG AATTTTTGAT ATGTACTCAG
GATTCAGATG GTTGTTGGAT CTATAGTAAA TATAAAAGTG GAAAGGTAAG GCGTCAAACT
GATTTTCATC AAGGTTTTAT AATAGATTCT TTGGTTGAAT ATCTTCCTTT TGCTGAGCCA
AAAAAACAGG ACCAATTAAT TGAATCAATT AAATTAGGTG TAAGCTTTTA CAGGAGAAAA
CAGTTTTTAG ATAACGGTAG ATGTTATTAC AGATATCCCA AATTATATCC TATAGATATA
CATAATCAAG CTCAAGGTGT AATTACTTTT AGTAAGTTAA GTGCGTTTGA TGTGGAATTC
CTTGAGTTTG CAAAGCAAAT ATTGGAGTGG ACAATTTTTA ATATGCAGGA TAATTCTGGA
TATTTTTTTT ACCAAAAAAA CAGGATTCTT ACAAACAAAA TTCCATATAT GAGATGGGGG
GCAGCTTGGA TGATGCTAGC CATGGCAACG TATTTAGAAA AGTGGGAGTG A
 
Protein sequence
MSFDVLVDNS IKSLYEWVKS EEYYGWDPYD ALNSEMINKF CSDSQLLEIL ITQLNKYSIL 
NIRPIIGIEK GLDIKGISLF AQSFSKIYTL TNDQRYKSDL FECTNILKNK SLKQKYDFDC
WAGHYFNYRS FDGSILTPDI PDVITTSNVI KAMADSYLIF KDDELKEIVK SAYDFFIRYL
LEKTDEGLYY LKYNTLSENK IVINASAEGL SAICRLMPLF DDNEMKRIAF KLSEFLICTQ
DSDGCWIYSK YKSGKVRRQT DFHQGFIIDS LVEYLPFAEP KKQDQLIESI KLGVSFYRRK
QFLDNGRCYY RYPKLYPIDI HNQAQGVITF SKLSAFDVEF LEFAKQILEW TIFNMQDNSG
YFFYQKNRIL TNKIPYMRWG AAWMMLAMAT YLEKWE