Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_B3747 |
Symbol | |
ID | 3617463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007349 |
Strand | + |
Start bp | 7921 |
End bp | 9111 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637695323 |
Product | hypothetical protein |
Protein accession | YP_300078 |
Protein GI | 73663832 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.652201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTTTG ATGTCCTTGT GGATAATTCC ATAAAATCGC TTTATGAGTG GGTAAAAAGT GAAGAGTACT ATGGATGGGA CCCTTATGAT GCACTAAACA GTGAAATGAT AAACAAATTC TGTTCGGACT CTCAGCTACT GGAGATATTG ATAACTCAAT TGAATAAGTA TTCTATCTTA AACATCAGGC CAATTATAGG TATTGAAAAA GGGCTGGATA TAAAAGGTAT ATCCCTTTTT GCTCAATCGT TTTCAAAAAT TTATACTTTA ACAAATGATC AACGGTATAA AAGTGATCTA TTTGAGTGTA CCAATATTTT AAAAAATAAA TCTCTCAAAC AAAAGTATGA TTTTGATTGC TGGGCAGGAC ATTATTTTAA CTATCGGAGC TTCGATGGAA GTATATTAAC TCCAGATATA CCTGATGTTA TCACAACATC AAATGTGATC AAAGCAATGG CTGACAGTTA TCTAATTTTT AAGGATGATG AATTAAAAGA GATTGTAAAA AGTGCCTATG ATTTCTTTAT CAGATATCTA CTGGAAAAAA CAGACGAGGG CCTTTATTAC CTAAAGTACA ATACTTTAAG TGAAAATAAA ATCGTAATAA ATGCTTCTGC TGAAGGTTTA AGTGCAATAT GCAGGTTAAT GCCTCTATTT GACGATAATG AGATGAAAAG AATAGCATTC AAGCTTTCCG AATTTTTGAT ATGTACTCAG GATTCAGATG GTTGTTGGAT CTATAGTAAA TATAAAAGTG GAAAGGTAAG GCGTCAAACT GATTTTCATC AAGGTTTTAT AATAGATTCT TTGGTTGAAT ATCTTCCTTT TGCTGAGCCA AAAAAACAGG ACCAATTAAT TGAATCAATT AAATTAGGTG TAAGCTTTTA CAGGAGAAAA CAGTTTTTAG ATAACGGTAG ATGTTATTAC AGATATCCCA AATTATATCC TATAGATATA CATAATCAAG CTCAAGGTGT AATTACTTTT AGTAAGTTAA GTGCGTTTGA TGTGGAATTC CTTGAGTTTG CAAAGCAAAT ATTGGAGTGG ACAATTTTTA ATATGCAGGA TAATTCTGGA TATTTTTTTT ACCAAAAAAA CAGGATTCTT ACAAACAAAA TTCCATATAT GAGATGGGGG GCAGCTTGGA TGATGCTAGC CATGGCAACG TATTTAGAAA AGTGGGAGTG A
|
Protein sequence | MSFDVLVDNS IKSLYEWVKS EEYYGWDPYD ALNSEMINKF CSDSQLLEIL ITQLNKYSIL NIRPIIGIEK GLDIKGISLF AQSFSKIYTL TNDQRYKSDL FECTNILKNK SLKQKYDFDC WAGHYFNYRS FDGSILTPDI PDVITTSNVI KAMADSYLIF KDDELKEIVK SAYDFFIRYL LEKTDEGLYY LKYNTLSENK IVINASAEGL SAICRLMPLF DDNEMKRIAF KLSEFLICTQ DSDGCWIYSK YKSGKVRRQT DFHQGFIIDS LVEYLPFAEP KKQDQLIESI KLGVSFYRRK QFLDNGRCYY RYPKLYPIDI HNQAQGVITF SKLSAFDVEF LEFAKQILEW TIFNMQDNSG YFFYQKNRIL TNKIPYMRWG AAWMMLAMAT YLEKWE
|
| |