Gene Mbar_B3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_B3746 
Symbol 
ID3617462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007349 
Strand
Start bp6745 
End bp7857 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content35% 
IMG OID637695322 
Producthypothetical protein 
Protein accessionYP_300077 
Protein GI73663831 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGATTG CATTTTTTAT AAATACACCT GCGCACGTTC ACTTGTATAA AAATGTTATT 
AAAACTTTGG AATTCAGCGG GCATCAAGCT ATTGTCTTGG CCAGAAACTA TGGAGATACA
GTTAGCCTAT TAGATGAAAT GGGGTTTGAG TATTTCGTAT ATGCCAATGC ACCGGATTCA
AAATATGGGA AAATCTTAGC TTTACCTTTC AATGTGTTAA CAGCATATAG TTTTCTTCGA
AAGAAAAAGC CTGATTTATT GGTTGGAGTG GGAGTTTACT CAGCGTATAC ATCACAATTA
CTGCATAAAA AATGCATAAT ATTTAATGAT TCTGAACCTG CACCTTTTCA GTTCATGCTT
TTTAAGCCGT TTGTGGATGT GATTCTCACT CCTTCATCGT TTACCGTTGA TCTGGGTCCA
AAGCACATTA AATTTAATAG CTTTAAAGAA ATTGCTTATT TACATACAAA CTATTTTGTG
CCAGATGTTA AAATCCATGA TTTTCTTGGG ATAGGCCAAG AGGATGATTA TGTTCTTTTA
CGTTTCAATG CGTTTGATGC TGTACATGAT CTTGGTATAA GCGGCTTTTC TATTGATGAA
AAAAGACTTC TGGTTAATGA ACTGAGCAAG TATACCCGTG TGTTTATTTC GTCTGAACTA
AAACTGCCAG ATGATTTTAA CAAATACTTG TTGAAAATCC CAAAATCTCG CATTCACGAT
ATTCTGTATT ACGCAAAACT TGTTGTGGCA GATACCCAGA CAATAACTAC TGAATCTGCA
GTTCTTGGTA CTCCAGTTGT CAGGTTTAAT TCCTTTGTAG GTAAGAAAGA CATGGGTAAT
TTCATTGAAC TTGAAAACAA GTATCGTCTT ATTTTTAGCT TCAGTGATCC TGCAAAAGCA
ATTGCAAAAG CTGTAGAACT TATTCAAGAA CCAGAGCTAA AAAACAAATG GAAAGAAAAA
AGAGATAGAC TCCTGGATGA CAAAATCGAC GCTACCAAAT TTTTGTCTTT TTTTATTGAA
AATTATCCTG AAAGTCTAAA CAAAATAAAA GCTGCACAAA ACTATTCTAA ACGAGAGGGT
AGTGTCGTCG CCCTGCAGGG TGATTTGCTA TGA
 
Protein sequence
MRIAFFINTP AHVHLYKNVI KTLEFSGHQA IVLARNYGDT VSLLDEMGFE YFVYANAPDS 
KYGKILALPF NVLTAYSFLR KKKPDLLVGV GVYSAYTSQL LHKKCIIFND SEPAPFQFML
FKPFVDVILT PSSFTVDLGP KHIKFNSFKE IAYLHTNYFV PDVKIHDFLG IGQEDDYVLL
RFNAFDAVHD LGISGFSIDE KRLLVNELSK YTRVFISSEL KLPDDFNKYL LKIPKSRIHD
ILYYAKLVVA DTQTITTESA VLGTPVVRFN SFVGKKDMGN FIELENKYRL IFSFSDPAKA
IAKAVELIQE PELKNKWKEK RDRLLDDKID ATKFLSFFIE NYPESLNKIK AAQNYSKREG
SVVALQGDLL